Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq175891 100 2e-16 seq188148 89.7 4e-13 seq185055 89.7 4e-13 >seq175891 Length=10111 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| |||| || ||||| ||||| ||||||||| ||| || || | Sbjct 9230 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACCATTACCTTGGAAGTAGAGCCATCT 9289 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| |||||| |||||||||||| | || |||||| Sbjct 9290 GATACCATTGAAAATGTCAAGGCTAAAATTCAAGATAAAGAAGGTATTCCTCCAGATCAG 9349 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | | || || || || || || |||||||| ||| || ||||||| || Sbjct 9350 CAACGTTTGATTTTCGCCGGTAAGCAGTTGGAAGATGGACGTACTTTGTCCGATTATAAC 9409 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176 || || ||||||||||| |||||| |||| || || Sbjct 9410 ATCCAAAAGGAATCTACCCTTCACTTGGTTTTGCG 9444 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 ||||||||||| ||| | || || || || ||||| ||||| ||| || ||||| Sbjct 8087 AAAATGCAAATCTTCGTGAAGACCTTAACTGGCAAGACCATCACCTTAGAGGTCGAACCT 8146 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | | | ||| |||||| ||||| || ||| | ||| |||| Sbjct 8147 TCTGATACTATTGAGAACGTCAAGGCTAAAATTCAAGATAAGGAGGGTATTCCCCCAGAT 8206 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 |||||| | | || ||||| || |||||| ||||||| ||| || |||||||| Sbjct 8207 CAACAACGTTTGATTTTTGCCGGTAAACAATTGGAAGACGGACGCACTTTGTCCGATTAC 8266 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176 || ||||| || |||||||| ||||| |||| |||| Sbjct 8267 AACATTCAAAAAGAATCTACACTTCATTTGGTTCTACG 8304 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| ||||||| ||||| ||||| || || || ||| || || | Sbjct 9458 ATGCAAATCTTCGTCAAAACCTTGACCGGCAAGACTATCACTTTGGAAGTTGAGCCATCC 9517 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| |||||| |||||||||||| | || ||||||| Sbjct 9518 GATACCATTGAAAATGTCAAGGCAAAAATCCAAGATAAAGAAGGTATTCCTCCAGATCAA 9577 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | | || || || || |||||| ||||||| ||| || ||||||| || Sbjct 9578 CAACGTTTGATTTTCGCTGGTAAACAATTGGAAGACGGACGCACTTTGTCCGATTATAAC 9637 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176 || || ||||| ||||| |||||| |||| || || Sbjct 9638 ATCCAAAAGGAGTCTACCCTTCACTTGGTTTTGCG 9672 >seq188148 Length=18106 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| ||||||| || || || |||||||||||| ||| || || | Sbjct 3839 ATGCAGATCTTCGTCAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTCGAGCCTTCC 3780 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| ||||| || ||||||||| | ||| ||||||| Sbjct 3779 GACACCATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATCCCCCCAGATCAA 3720 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | | ||||| || || |||||| |||||||| || || |||| ||||| Sbjct 3719 CAACGTTTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGTACCTTGTCCGACTACAAC 3660 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGT 29170 || || |||||||| ||| | || |||| Sbjct 3659 ATCCAAAAGGAATCCACTTTACATTTGGT 3631 >seq185055 Length=12631 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||||||||| | ||| |||||||||| | | ||||| || ||||||||| | || Sbjct 12559 GATAAAGAAGGCATTCCCCCAGATCAACAACGTTTGATCTTCGCTGGCAAACAATTAGAG 12500 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | ||| || | || ||||| || || |||||||||||||| || ||||| || Sbjct 12499 GATGGCCGTACTCTGTCTGACTACAACATCCAAAAGGAATCTACTCTCCATTTGGTGCTA 12440 Query 29175 CGATTACGAGGAGG 29188 || | || ||||| Sbjct 12439 CGTCTTCGCGGAGG 12426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427331292401300