Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq191290 181 7e-41 >seq191290 Length=35329 Score = 181 bits (200), Expect = 7e-41 Identities = 402/598 (67%), Gaps = 4/598 (1%) Strand=Plus/Minus Query 97033 AGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGA 97092 |||||||| | | || ||||| |||||| ||||| || | ||| || || ||| Sbjct 7285 AGCTGCTCCTTTAAAGGTTCAATATGATTCTTATAAACATGTGTATCACCAGTGGTATGA 7226 Query 97093 ATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAG 97152 ||||| ||||| || | ||||| | ||| || |||||| | |||| || || ||| Sbjct 7225 ATAAAATCTCCTGGTCTCAGGTCAGTTATATGAGCAATCATATAGGTTAGTAAAGCATAA 7166 Query 97153 CTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAG 97212 ||| || ||||| || || || || ||||||||||| | |||||||| |||||| Sbjct 7165 GAAGCTATATTAAATGGTACACCAAGACCCATATCAGCACTACGTTGATATAGCTGACAA 7106 Query 97213 GAAAGCTTTCCATCACACACATAAAACTGACTCAATACA-TGACAGGGGGGCAACGCCAT 97271 || | | |||| | ||||| || || ||| ||| ||||| || ||||| ||||| Sbjct 7105 GATAATTCACCATTAGCAACATAGAATTGTGCCAA-ACAGTGACAAGGTGGCAAAGCCAT 7047 Query 97272 TTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGT 97331 || ||| | ||| | ||||||||| |||| | || | |||||| | || || || Sbjct 7046 TTGTGGTATATCAACAGGATTCCAAGCTGACATAATTATGCGTCTATCATTGGGATTAGT 6987 Query 97332 GTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTT 97391 | ||||||||||||| | || || |||||||| || ||||| || | | || Sbjct 6986 GCGTATGGTATTAATGACCTCTTTCAATTGATCGACACCTTCATTGGTGTAGTCATCATT 6927 Query 97392 AAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTC 97451 | |||||| || |||||||| | |||||| || ||||| || || || | || Sbjct 6926 ACATGTGCGATATTTGGCACCAAAATGACGCCATTGAAAACCATACACCGGACCCAAATC 6867 Query 97452 TCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATC 97511 ||||||||| | || |||||| | ||||| ||| | | | | ||| |||| Sbjct 6866 TCCTTCTTCACGTTCGGTGAAACCTAATTTATCCAAAAATTTACGATCACTATTACCATC 6807 Query 97512 CCAAATGTGCACA-CCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACC 97570 |||||| || | | | ||||| | |||| ||||| | || | ||||| Sbjct 6806 CCAAATATGTATATTTTTCTCTTGCAATAT-TTTGGCATCAGTGCAACCATGTACAAACC 6748 Query 97571 ACAACAATTCTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628 |||| | || || | || | | ||||||||||| || || ||||| | |||||| Sbjct 6747 ACAAAAGCTCCTCAGCTACTGCCCGCCAAAATACTCGTTTTGTGGTTAACAAAGGAAA 6690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345970581282200