Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq185055 82.4 5e-11 >seq185055 Length=12631 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | ||||||| || | |||| ||| || || ||||||||||| ||| Sbjct 12426 CCTCCGCGAAGACGTAGCACCAAATGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 12485 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| | || || || || ||||| ||||| || | || || || || ||| Sbjct 12486 AGAGTACGGCCATCCTCTAATTGTTTGCCAGCGAAGATCAAACGTTGTTGATCTGGGGGA 12545 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || || || || ||||| ||| | || | || | ||||| | |||||| Sbjct 12546 ATGCCTTCTTTATCTTGGATCTTAGCCTTAACATTTTCAATGGTATCGGATGGTTCGACT 12605 Query 34343 TCCACCGTGATGGTTTTGCCGGT 34365 |||| ||||| ||||||||||| Sbjct 12606 TCCAAAGTGATAGTTTTGCCGGT 12628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322314200297600