Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq191290 176 4e-39 >seq191290 Length=35329 Score = 176 bits (194), Expect = 4e-39 Identities = 386/577 (67%), Gaps = 20/577 (3%) Strand=Plus/Plus Query 20209 CGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAA 20268 ||| |||| || ||||||||||| |||||||| ||||||||| | |||||||| || || Sbjct 6855 CGTGAAGAAGGAGATTTGGGTCCGGTGTATGGTTTTCAATGGCGTCATTTTGGTGCCAAA 6914 Query 20269 TATGT----TGACATGA-----ACACAAATTATTTTGGACAAGGAGTAGATCAATTACAA 20319 ||| || |||| |||| ||| | ||| || |||||||| || Sbjct 6915 TATCGCACATGTAATGATGACTACACCAATGA---------AGGTGTCGATCAATTGAAA 6965 Query 20320 AATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGG 20379 | || |||||| || || || || || || ||| | || ||| | | || ||| Sbjct 6966 GAGGTCATTAATACCATACGCACTAATCCCAATGATAGACGCATAATTATGTCAGCTTGG 7025 Query 20380 AACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTA 20438 || || ||| | || |||||||||||| || ||||| || | || ||||| || Sbjct 7026 AATCCTGTTGATATACCACAAATGGCTTTGCCACCTTGTCAC-TGTTTGGCACAATTCTA 7084 Query 20439 CGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGG 20498 ||||||||| |||||| || ||||| | |||||||| ||||||||||| || || Sbjct 7085 TGTTGCTAATGGTGAATTATCTTGTCAGCTATATCAACGTAGTGCTGATATGGGTCTTGG 7144 Query 20499 TGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGA 20558 ||| || || ||||| || |||||| | || || ||||||||||| ||| | || || Sbjct 7145 TGTACCATTTAATATAGCTTCTTATGCTTTACTAACCTATATGATTGCTCATATAACTGA 7204 Query 20559 TTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATAT 20618 | | | | || || || | || |||| || || | ||| |||| |||||||| Sbjct 7205 CCTGAGACCAGGAGATTTTATTCATACCACTGGTGATACACATGTTTATAAGAATCATAT 7264 Query 20619 AGAACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTAC 20678 ||||||||||| ||| ||| ||| ||||| | || || | | || | Sbjct 7265 TGAACCTTTAAAGGAGCAGCTAAAACGGAAACCACGCCCCTTTCCTAAATTGGTTATAAA 7324 Query 20679 TCGAACTGTTAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAA 20738 ||| || ||||||| | ||||| ||| ||| ||||||| | | | |||||| Sbjct 7325 GAGAAAAGTCGAAGATATAGATGATTTCAAATTTGAAGATTTTGAAATTGTCGATTATAA 7384 Query 20739 TCCCCATAATTCAATTCCAATGGAAATGTCTGTTTAA 20775 || || |||| |||| ||||| | |||||| Sbjct 7385 ACCTTATCCAAAAATTGAAATGCAAATGGCGGTTTAA 7421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398247671514700