Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq173136 89.7 1e-12 >seq173136 Length=30018 Score = 89.7 bits (98), Expect = 1e-12 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 93571 TTCACCACTTGGAATGATCCTGAAAGTACATTACGATTATACATGTTGGACGTTAAAGGC 93630 || || || | |||| |||||| || ||| || |||| ||||| || || |||| Sbjct 3536 TTAACAACATTGAATTCTCCTGATAGCACACGTCGGGTATATATGTTAGAAGTATAAGGT 3477 Query 93631 TCAAAGGATTCAGAGTTGCCCAGGATCTGTGCAGTGGATGCAGTAGGCATGGGAGCAACA 93690 ||||| |||||| ||||||| ||||| || || ||||| |||||||||||||||| | Sbjct 3476 TCAAATGATTCATTATTGCCCAAAATCTGAGCGGTAGATGCTGTAGGCATGGGAGCAATA 3417 Query 93691 AACATTGAATTGTGAACACCAT 93712 | || || || | ||||||| Sbjct 3416 AGCAAAGAGTTACGTACACCAT 3395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 987143790999300