Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq178124 84.2 1e-11 >seq178124 Length=11356 Score = 84.2 bits (92), Expect = 1e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 3875 GGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGCAA 3934 || || |||||| | |||||||| ||||| || || ||||| || ||||||||||| || Sbjct 9334 GGCGTCCATTTTGTTATGGCTGATGGTGGATTTTCCGTTGAAGGACAAGAAAATATTCAG 9275 Query 3935 GAAATGTTATCGAAAAAGATGTATTTGTGTCAATGT 3970 || || ||||| || || | ||||| ||||||||| Sbjct 9274 GAGATATTATCAAAGAAACTTTATTTATGTCAATGT 9239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 275904914147380