Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq22680 134 1e-26 seq173136 125 7e-24 seq188148 104 2e-17 seq137448 84.2 2e-11 seq175891 82.4 7e-11 >seq22680 Length=2395 Score = 134 bits (148), Expect = 1e-26 Identities = 170/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 26767 AAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAA 26826 |||||||| | ||||| |||||| |||| ||||| | || || | || | ||| | Sbjct 1003 AAATGCAAATCTTTGTCAAAACACTAACAGGAAAGACAATAGCCTTGGAGGTCGAAAGCA 944 Query 26827 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATC 26886 ||||| ||||| | || ||| |||||| ||||||||||| || ||||| || | Sbjct 943 CAGACACGATCGAAAACGTAAAAGCAAAGATCCAAGACAAAGAAGGAATCCCTCCAGACC 884 Query 26887 AACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATA 26946 |||||||| | || | || || ||||| ||||| |||| || | | | | |||||| | Sbjct 883 AACAAAGATTGATATTCGCAGGTAAACAGCTCGAGGATGGAAGGACCCTTAACGACTACA 824 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAAAA 27000 |||| ||||| ||| || | |||||||| || ||||| |||||||| |||| Sbjct 823 ACATCCAAAAGGAAAGCACCTTACATCTGGTACTAAGACTGAGAGGAGGTAAAA 770 >seq173136 Length=30018 Score = 125 bits (138), Expect = 7e-24 Identities = 653/1008 (65%), Gaps = 48/1008 (5%) Strand=Plus/Minus Query 147114 ACGGTGAATTGAATCGTGTTTGCTGCGGGTTTGGTTCTCAAATAGTACATGCCCGTTTTT 147173 || || ||||| || | || || || ||||| ||||| |||||||||||||| || ||| Sbjct 3878 ACAGTAAATTGTATAGCATTGGCGGCTGGTTTTGTTCTTAAATAGTACATGCCGGTCTTT 3819 Query 147174 AAACCCTTTTCCCAAGAATAGTCGTGAATGGATGATAAAACTTTA---TAGGTTGGATTG 147230 || || | |||||||||| || || || | ||| |||| || | || | Sbjct 3818 AAGCCAGCCTTCCAAGAATAGAAATGTATAGAGGTTAA---TTTACCGTAATTAGGTTCA 3762 Query 147231 GCCACAAAAAGATTGAGCGATTGGCTCTGATCGATGTAAGGTCCCCGCTCTGCGGCCATG 147290 || || | || | ||||| || ||||| ||| ||| || || || |||||||| Sbjct 3761 GCTACGTGTATGTTAAAGGATTGACTTTGATCTATGAAAGCGCCACGATCGGCGGCCATT 3702 Query 147291 TCCAACACTACTTTTTGTTTAA-TTTCCCAAGCGGTCTTGAAGAGCGCCTTGATATTGTG 147349 | || | || || || |||||||| | ||||| | || | ||||| | Sbjct 3701 TT-AATTGTGCTCTTGACGGAAATTTCCCAAACTGTCTTATAAAGGTCACGAATATTTTT 3643 Query 147350 TGGAATTTCATCAATATTTTGTACAGATCCG---TTGTTTTTAATAATTTTTATCATGAT 147406 |||||||| || || ||||| ||||||| ||| | |||| | ||| |||| | Sbjct 3642 GGGAATTTCTTCTATGGCTTGTATAGATCCGCGATTGGATATAATTTTATTTTTCATATT 3583 Query 147407 ATCTGTCGA-ATAT-ACGTTGGTGTCTACGAGTTTATCGACGAGATGCTGATTGACCAC- 147463 ||| | | | || | ||| ||| || | | | || | | ||| ||||| || || Sbjct 3582 ATCATCCCACAAATCAAGTTC-TGT-TA--AATCTTTCAATAA-ATGATGATTAACAACA 3528 Query 147464 TTGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGA 147523 |||| | || || || || || | ||| || | ||| |||| | || || || || Sbjct 3527 TTGA-ATTCTCCTGATAGCACACGTCGGGTATATATGTTAGAAGTATAAGGTTCAAATGA 3469 Query 147524 CTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATAATGA 147583 || || || || | |||||| || || | ||| || |||||| |||||| | || || Sbjct 3468 TTCATTATTGCCCAAAATCTGAGCGGTAGATGCTGTAGGCATGGGAGCAATAAGCAAAGA 3409 Query 147584 ATTGCGTAAGCCGTGCATAGCCA---TTTCTCGCTTAAGCTCGTCCCAGTTCCAAAGATC 147640 || |||| || || | || ||| || |||| || || | | ||| | || Sbjct 3408 GTTACGTACACCATG--TTGCTTGATTTTTTCTTTTAATGCCGACCAA-TCCCACAAGTC 3352 Query 147641 ATTCGATTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCACAACTTGCAGGGCTTCC 147700 | | | | ||| ||||||||| |||| | |||| | ||| || | || | || Sbjct 3351 AGTAGGT--GTTT-TATTCCACATATCATATTGTAGTATTCCTTTGCTAACTGGACAGCC 3295 Query 147701 ATCGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTTTGACT-TAGTGCAC 147759 || | || ||||| || | || || | ||| ||| | || || |||| Sbjct 3294 GGGATAGGTTTCATATGTACCATATTTTTCTGCCAATTCACAACTG-GCCTCTAAGGCAC 3236 Query 147760 CATAATAAATAGTTTCTGAAATCTTT-TTATTTAAATCTCTAG-CCTCTTGGCTGTCGTA 147817 |||||||||| ||||| |||| ||| || || ||| || ||| || || || || Sbjct 3235 CATAATAAATGGTTTC--AAATATTTGTTGGTTCAATAAAAAGGCCTGTTCACTCTCATA 3178 Query 147818 GGGCATATCCA---AAATGGCGAACGTATCCGCAAGTCCTTGAATACCGATACCGATGGG 147874 ||| | || |||| || ||||| |||| || || | ||| ||||| ||||| Sbjct 3177 GGGGAAGCGCATTAAAATC---AAAGTATCAGCAAAACCCTGGACACCTATACCAATGGG 3121 Query 147875 TCGGTGTCTGAAATTCGATG-CTTGAGCGCTAGCCAACGGATAAAAATTCAAGTCGATAA 147933 || || | | ||| ||| ||| | || || | |||||| |||| | ||| |||| Sbjct 3120 GCGATGACGCAGATTAGATTTCTTTGCCTCTGGC-AGGGGATAATAATTTATGTCTATAA 3062 Query 147934 TTTTATTGAGATTATTGGTAACCACTCTAGATACATTGTAGAGCGACTTAAAGTCGAAGC 147993 ||||||| | ||| |||||| ||| ||| ||||| | | |||||||||||| Sbjct 3061 TTTTATTTAAATTCCTGGTAATAACTTTAGTAACATTTTTCAATTTCTTAAAGTCGAATG 3002 Query 147994 TTTTAAACTGTTTATTGGCAAAATTATTTACGGCAATCGAGGCCAAGTTACACACGGCCG 148053 |||| || || |||| |||| | ||||| |||||||| ||||| ||||| Sbjct 3001 TTTTCTCAGGTGTA---ACAAACATATTAAGCGCAATGGAGGCCAAATTACAAACGGCTA 2945 Query 148054 TTTC-TCGATTGTCGCTATATTGAACGATTTCGGCACACAGATTGCTG 148100 |||| ||| | | ||||| || ||||| | |||||| |||||| Sbjct 2944 TTTCATCG-GGGGCAGAATATTCTACAATTTCTGTACACAGGTTGCTG 2898 >seq188148 Length=18106 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| |||||||| ||| | || ||| | ||| | || | | Sbjct 3839 ATGCAGATCTTCGTCAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTCGAGCCTTCC 3780 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | ||||| || || ||||||||||| || || || |||||| Sbjct 3779 GACACCATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATCCCCCCAGATCAA 3720 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | || | || ||| |||||| | ||||||| | | | | | |||||| ||| Sbjct 3719 CAACGTTTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGTACCTTGTCCGACTACAAC 3660 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||| ||||| ||| | ||| |||| || Sbjct 3659 ATCCAAAAGGAATCCACTTTACATTTGGTACT 3628 >seq137448 Length=735 Score = 84.2 bits (92), Expect = 2e-11 Identities = 163/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 26767 AAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAA 26826 |||||||| | ||||| |||||| | || ||||| | || || | ||| | ||| Sbjct 257 AAATGCAAATCTTTGTCAAAACACTCACGGGAAAGACAATTACATTGGAAGTTGAAGGGG 198 Query 26827 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATC 26886 || || || ||| | || || || || |||||||||||||||||||| || | Sbjct 197 GTGATACAATTGAGAATGTAAAGGCGAAAATACAGGACAAAGAAGGGATACCTCCTGACC 138 Query 26887 AACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATA 26946 | |||||| | || | | || || || || || |||| || | | | ||||||| Sbjct 137 AGCAAAGATTGATATTTGCAGGGAAGCAGCTTGAGGATGGAAGGACATTAAATGACTATA 78 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAAAATATGAT 27006 | || || || || |||| | ||||| || ||||||| ||||| || ||| | ||| Sbjct 77 ATATACAGAAGGAGAGTACTTTACATCTTGTGTTGAGACTGAGAGGTGGTAAATAAAGAT 18 Query 27007 T 27007 | Sbjct 17 T 17 >seq175891 Length=10111 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 ||||||||| | || || || || |||||||| || | |||||| | || | ||| | Sbjct 8087 AAAATGCAAATCTTCGTGAAGACCTTAACTGGCAAGACCATCACCTTAGAGGTCGAACCT 8146 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 || || || ||| | ||||| || ||| || || || || || || || ||| Sbjct 8147 TCTGATACTATTGAGAACGTCAAGGCTAAAATTCAAGATAAGGAGGGTATTCCCCCAGAT 8206 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 |||||| | | |||| | ||| |||||| | ||||| | | | | ||| || Sbjct 8207 CAACAACGTTTGATTTTTGCCGGTAAACAATTGGAAGACGGACGCACTTTGTCCGATTAC 8266 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||||||||||||||| | ||| |||| || Sbjct 8267 AACATTCAAAAAGAATCTACACTTCATTTGGTTCT 8301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477510857931200