Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq175891 95.1 1e-14 seq188148 93.3 4e-14 seq137448 87.8 2e-12 seq21005 87.8 2e-12 >seq175891 Length=10111 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| |||||||| || | || || |||||||| || | || ||| | | Sbjct 8318 ATGCAAATCTTTGTCAAGACATTGACTGGCAAAACCATCACTTTGGAGGTTGAGCCTTCC 8377 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| ||| | | |||||| |||||| || || ||||| ||||| ||||| Sbjct 8378 GATACTATTGAAAATGTAAAAGCTAAAATTCAAGACAAGGAAGGAATCCCCCCAGATCAA 8437 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | | |||| ||| ||||||||||| ||||| | || || | ||||| || Sbjct 8438 CAACGTTTGATTTTTGCTGGCAAACAATTGGAAGACGGGCGCACATTGTCTGATTACAAT 8497 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTT 115497 ||||||||||| || || | ||| |||| || Sbjct 8498 ATTCAAAAAGAATCCACATTGCATTTGGTATT 8529 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || ||||| || | || || || ||||||||| | ||| ||| ||| | Sbjct 9230 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACCATTACCTTGGAAGTAGAG-CCATC 9288 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || || |||||| ||||||||||| | || ||||| Sbjct 9289 TGATACCATTGAAAATGTCAAGGCTAAAATTCAAGATAAAGAAGGTATTCCTCCAGATCA 9348 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | | |||| || || || || || ||||||| || || |||||||||| Sbjct 9349 GCAACGTTTGATTTTCGCCGGTAAGCAGTTGGAAGATGGACGTACTTTGTCCGATTATAA 9408 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 ||| ||||| || ||||| | || |||| ||| Sbjct 9409 CATCCAAAAGGAATCTACCCTTCACTTGGTTTTG 9442 >seq188148 Length=18106 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || || |||||||| | || || |||||||||||| | ||| ||| | | Sbjct 3839 ATGCAGATCTTCGTCAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTCGAGCCTTCC 3780 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | || || ||||| || |||||||| ||||| ||||| Sbjct 3779 GACACCATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATCCCCCCAGATCAA 3720 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | | || | || || |||||||| ||||||| ||| || |||| || ||| Sbjct 3719 CAACGTTTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGTACCTTGTCCGACTACAAC 3660 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGT 115494 || ||||| || || ||| ||||| |||| Sbjct 3659 ATCCAAAAGGAATCCACTTTACATTTGGT 3631 >seq137448 Length=735 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 115284 AAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCA 115343 |||||||||| ||||||||||| ||||||||||| || ||||| | ||| || Sbjct 257 AAATGCAAATCTTTGTCAAAACACTCACGGGAAAGACAATTACATTGGAAGTTGAAGGGG 198 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | || || ||| | ||||| ||||| || |||||||| | || ||| | Sbjct 197 GTGATACAATTGAGAATGTAAAGGCGAAAATACAGGACAAAGAAGGGATACCTCCTGACC 138 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||||||| | || | ||| || || || | || |||| | || | || |||| Sbjct 137 AGCAAAGATTGATATTTGCAGGGAAGCAGCTTGAGGATGGAAGGACATTAAATGACTATA 78 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAAA 115516 | || || || ||| |||| ||||| | ||||||||| || |||| || ||| Sbjct 77 ATATACAGAAGGAGAGTACTTTACATCTTGTGTTGAGACTGAGAGGTGGTAAA 25 >seq21005 Length=2931 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 109254 ACGTTTGCGCACTTTTGCAGAATGGCCTCGTGGTTTGAAACAGCAACCCGATAAACTAGC 109313 |||||| ||| ||||| || |||||||| |||||||||| | || || ||||||| Sbjct 1241 ACGTTTAAACACATTTGCTGATTGGCCTCGAAGTTTGAAACAAAAGCCTGAACAACTAGC 1182 Query 109314 CGAGGCCGGGTTTTATTACACGGGCCAGGGCGATAAAACCAAATGTTTTTATTGTGACGG 109373 ||||||||||| | ||| | |||| || ||| | ||||||| |||| || Sbjct 1181 TGAGGCCGGGTTCTTTTATAGGGGCACTGGGGATGCTGTTATATGTTTTAGTTGTTTGGG 1122 Query 109374 CGGTTTGAAAGACTGGGAGGCGGACGATGAGCCGTGGAAAC 109414 || | ||||| ||||||| |||||||| || ||| ||| Sbjct 1121 TGGCCTCAAAGATTGGGAGGACGACGATGATCCCTGGGAAC 1081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424346310455200