Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq188148 95.1 1e-14 seq175891 84.2 2e-11 >seq188148 Length=18106 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 ||||||| ||| | ||||| |||||||| ||||||||||||| || ||| | || Sbjct 3628 AGTACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTACGACCATCT 3687 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 ||||||||||| || || | || | || ||||| || || | || |||||||| Sbjct 3688 TCCAATTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGGGGGATACCTTCTTTGTCT 3747 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 |||| ||| || | | | |||||| ||||| ||||| ||| |||||| Sbjct 3748 TGGATTTTAGCCTTGACATTTTCAATGGTGTCGGAAGGCTCGACTTCCAAGGTAATGGTT 3807 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || | |||||||| || |||||||| Sbjct 3808 TTACCAGTTAAAGTTTTGACGAAGATCTGCAT 3839 >seq175891 Length=10111 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 16726 TACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTC 16785 ||||| ||||| ||||| || ||||| || ||||| || | || || |||| || Sbjct 8527 TACCAAATGCAATGTGGATTCTTTTTGAATATTGTAATCAGACAATGTGCGCCCGTCTTC 8468 Query 16786 CAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGC 16845 |||||||||||| ||| |||| | || ||||| || || | || || ||||| Sbjct 8467 CAATTGTTTGCCAGCAAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTGTCTTG 8408 Query 16846 AATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||||| ||| || || | | | ||| ||| ||||| |||| ||||||||| Sbjct 8407 AATTTTAGCT--TTTACATTTTCAATAGTATCGGAAGGCTCAACCTCCAAAGTGATGGTT 8350 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || |||| || |||||||| || ||||| Sbjct 8349 TTGCCAGTCAATGTCTTGACAAAGATTTGCAT 8318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404137823055400