Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_008252.1 Length=84264 Score E Sequences producing significant alignments: (Bits) Value seq20041 84.2 1e-11 seq181198 82.4 4e-11 >seq20041 Length=8989 Score = 84.2 bits (92), Expect = 1e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 25710 AAAGACGCGTGTCAAGGTGATTCGGGTGGACCAATGGTTGTTAACGATAGATTGGCTGGA 25769 ||||| || || ||||||||||| ||||| ||| |||||| ||| ||| ||||| ||| Sbjct 2339 AAAGATGCCTGCCAAGGTGATTCTGGTGGTCCATTGGTTGCCAACAATAAATTGGTTGGT 2280 Query 25770 ATCGTGTCGTGGGGAAATGGGTGTGGTAGAAATGGTTGGCCAGGTGTTTAC 25820 | || || ||||| || || |||| | ||||||| || ||||||||| Sbjct 2279 GTTGTTTCTTGGGGTAAGGGTTGTGCTCTTAATGGTTATCCCGGTGTTTAC 2229 >seq181198 Length=8948 Score = 82.4 bits (90), Expect = 4e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 25710 AAAGACGCGTGTCAAGGTGATTCGGGTGGACCAATGGTTGTTAACGATAGATTGGCTGGA 25769 || || || || ||||||||||| ||||| ||| |||||| ||| || ||||| ||| Sbjct 3670 AAGGATGCCTGCCAAGGTGATTCTGGTGGTCCATTGGTTGCCAACAATGAATTGGTTGGC 3611 Query 25770 ATCGTGTCGTGGGGAAATGGGTGTGGTAGAAATGGTTGGCCAGGTGTTTA 25819 | || || ||||| ||||| |||||| | | ||||| || |||||||| Sbjct 3610 GTTGTATCTTGGGGCAATGGTTGTGGTCGCAGTGGTTATCCCGGTGTTTA 3561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 268887812203500