Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq175891 129 5e-25 seq188148 89.7 4e-13 seq185055 87.8 2e-12 >seq175891 Length=10111 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||| |||||||| || |||| ||||||||||| || |||| || || | Sbjct 8318 ATGCAAATCTTTGTCAAGACATTGACTGGCAAAACCATCACTTTGGAGGTTGAGCCTTCC 8377 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| || ||| | |||||| |||||| ||||| ||||| | ||| |||||| Sbjct 8378 GATACTATTGAAAATGTAAAAGCTAAAATTCAAGACAAGGAAGGAATCCCCCCAGATCAA 8437 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | | |||| ||| ||||||||||||||||| || || | ||||| ||| Sbjct 8438 CAACGTTTGATTTTTGCTGGCAAACAATTGGAAGACGGGCGCACATTGTCTGATTACAAT 8497 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 || ||||||||||| ||| | ||||| || || ||| | || ||||||| Sbjct 8498 ATTCAAAAAGAATCCACATTGCATTTGGTATTACGTTTACGTGGTGGCA 8546 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||| || |||||||| |||||||||| || || || ||||| || || | Sbjct 9458 ATGCAAATCTTCGTCAAAACCTTGACCGGCAAGACTATCACTTTGGAAGTTGAGCCATCC 9517 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | ||| | || || |||||| || |||||||| |||| |||||| Sbjct 9518 GATACCATTGAAAATGTCAAGGCAAAAATCCAAGATAAAGAAGGTATTCCTCCAGATCAA 9577 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | | |||| || || |||||||||||||| ||| || |||||||||| Sbjct 9578 CAACGTTTGATTTTCGCTGGTAAACAATTGGAAGACGGACGCACTTTGTCCGATTATAAC 9637 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || ||||| || ||||| || || || || |||||||| || ||||| Sbjct 9638 ATCCAAAAGGAGTCTACCCTTCACTTGGTTTTGCGTCTCCGTGGTGG 9684 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 111184 AAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111243 ||||||||||| || || || || | || ||||| ||||| ||| | || ||||| Sbjct 8087 AAAATGCAAATCTTCGTGAAGACCTTAACTGGCAAGACCATCACCTTAGAGGTCGAACCT 8146 Query 111244 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111303 ||| || ||| | || || |||||| || || || || ||||| ||| Sbjct 8147 TCTGATACTATTGAGAACGTCAAGGCTAAAATTCAAGATAAGGAGGGTATTCCCCCAGAT 8206 Query 111304 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111363 |||||| | | |||| ||| || |||||||||||||| ||| || ||||||| Sbjct 8207 CAACAACGTTTGATTTTTGCCGGTAAACAATTGGAAGACGGACGCACTTTGTCCGATTAC 8266 Query 111364 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || ||||||||||||||||| ||||| || | ||||| || ||||| Sbjct 8267 AACATTCAAAAAGAATCTACACTTCATTTGGTTCTACGTCTTCGTGGTGG 8316 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||||||||| || || | |||||||| || || ||| | ||| || || Sbjct 8774 ATGCAAATTTTTGTAAAGACTTTAACCGGCAAGACTATCACCTTAGAAGTTGAGCCATCT 8833 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | ||| | || || ||||| ||||||||||| ||||| |||||| Sbjct 8834 GATACCATTGAAAACGTCAAGGCTAAAATCCAAGACAAAGAAGGTATTCCCCCAGATCAA 8893 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | | || | ||| || ||||||||||||||| || || | || || || Sbjct 8894 CAACGTTTAATCTTTGCTGGTAAACAATTGGAAGATGGCCGTACATTGTCGGACTACAAC 8953 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || |||||||||||||| || || ||||| || ||||| || ||||| Sbjct 8954 ATCCAAAAAGAATCTACCCTTCACTTAGTATTACGTCTCCGTGGTGG 9000 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||||||||| || ||||| | || || ||||| ||||| | || ||||| Sbjct 8546 ATGCAAATTTTCGTTAAAACCTTAACGGGAAAAACAATTACACTAGAGGTTGAACCTTCG 8605 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| || | | | || ||| ||||| ||||||||||| ||||| |||||| Sbjct 8606 GATACTATAGAAAACGTTAAAGCCAAAATCCAAGACAAAGAAGGTATTCCCCCAGATCAA 8665 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || | | || | || || ||||||||||||||| || || ||||||| || Sbjct 8666 CAGCGTTTAATCTTCGCTGGTAAACAATTGGAAGATGGACGTACATTGTCCGATTACAAC 8725 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || |||||||||||||| || || ||||| || ||||| || || || Sbjct 8726 ATCCAAAAAGAATCTACCCTTCACTTAGTATTACGTCTCCGTGGAGG 8772 >seq188148 Length=18106 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || || |||||||| | || || |||||||||||| ||||| || || | Sbjct 3839 ATGCAGATCTTCGTCAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTCGAGCCTTCC 3780 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || || ||||| ||||||||||| | ||| |||||| Sbjct 3779 GACACCATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATCCCCCCAGATCAA 3720 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | | || | || || ||||||||||||||| | || || |||| || || Sbjct 3719 CAACGTTTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGTACCTTGTCCGACTACAAC 3660 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || ||||| ||||| || ||||||| || | || || || ||||| Sbjct 3659 ATCCAAAAGGAATCCACTTTACATTTGGTACTCCGCCTTCGTGGTGG 3613 >seq185055 Length=12631 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 111209 TGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAAC 111268 ||||||||||||| || || ||||| ||||| |||| | ||| | || || Sbjct 12630 TGACCGGCAAAACTATCACTTTGGAAGTCGAACCATCCGATACCATTGAAAATGTTAAGG 12571 Query 111269 AAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCA 111328 || || || ||||||||| ||||| ||||||||| | | || | || |||| Sbjct 12570 CTAAGATCCAAGATAAAGAAGGCATTCCCCCAGATCAACAACGTTTGATCTTCGCTGGCA 12511 Query 111329 AACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTAC 111388 ||||||| || ||| ||| || | || || || || ||||| |||||||| || | Sbjct 12510 AACAATTAGAGGATGGCCGTACTCTGTCTGACTACAACATCCAAAAGGAATCTACTCTCC 12451 Query 111389 ATTTAGTGTTGCGTCTGCGCGGTGGC 111414 |||| ||| | ||||| ||||| ||| Sbjct 12450 ATTTGGTGCTACGTCTTCGCGGAGGC 12425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422047714732000