Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq175891 185 2e-41 seq188148 167 4e-36 seq22680 147 4e-30 seq185055 145 1e-29 seq5262 138 2e-27 seq137448 123 5e-23 >seq175891 Length=10111 Score = 185 bits (204), Expect = 2e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| ||||| |||||||| || || || || ||||||||||||||||| || Sbjct 9228 CCACCACGAAGACGCAAAACCAAGTGAAGGGTAGATTCCTTTTGGATGTTATAATCAGAC 9169 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | ||| | |||||||| |||||||| |||||||| || | | ||||||||| || ||| Sbjct 9168 AATGTACGTCCATCTTCCAACTGCTTACCGGCGAAAATCAAACGTTGTTGGTCTGGGGGA 9109 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||| || || || || ||||| || ||| || || || | || |||||| Sbjct 9108 ATACCTTCCTTATCCTGGATTTTAGCCTTTACATTCTCTATAGTATCAGATGGCTCTACT 9049 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||||||||| |||||||| || | ||| || || || || ||||| Sbjct 9048 TCCAAGGTGATAGTTTTTCCAGTCAAGGTTTTCACAAAGATTTGCAT 9002 Score = 185 bits (204), Expect = 2e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || ||||| |||||||| || || || || |||||||||||||||||||| Sbjct 9456 CCACCACGGAGACGCAAAACCAAGTGAAGGGTAGATTCCTTTTGGATGTTATAATCGGAC 9397 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| |||||||| |||||||| || | | ||| || || || ||| Sbjct 9396 AAAGTACGTCCATCTTCCAACTGCTTACCGGCGAAAATCAAACGTTGCTGATCTGGAGGA 9337 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| || |||||||| || |||||||| || ||||| || | || |||||| Sbjct 9336 ATACCTTCTTTATCTTGAATTTTAGCCTTGACATTTTCAATGGTATCAGATGGCTCTACT 9277 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||| ||||| || || || | |||||||||||| || ||||| Sbjct 9276 TCCAAGGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 9230 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || ||||| |||||||| || || ||||| |||||||||||||||||||| Sbjct 9684 CCACCACGGAGACGCAAAACCAAGTGAAGGGTAGACTCCTTTTGGATGTTATAATCGGAC 9625 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | || ||||| || || || || ||||| || | | |||||| || || ||| Sbjct 9624 AAAGTGCGTCCGTCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 9565 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| || ||||| || ||||||||||| || ||||| || | || || ||| Sbjct 9564 ATACCTTCTTTATCTTGGATTTTTGCCTTGACATTTTCAATGGTATCGGATGGCTCAACT 9505 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||| || || || || | ||| |||||||| || ||||| Sbjct 9504 TCCAAAGTGATAGTCTTGCCGGTCAAGGTTTTGACGAAGATTTGCAT 9458 Score = 150 bits (166), Expect = 3e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | ||||| || || || || |||||||| ||||| |||||||| Sbjct 8316 CCACCACGAAGACGTAGAACCAAATGAAGTGTAGATTCTTTTTGAATGTTGTAATCGGAC 8257 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | || ||||| || || || ||||| || || | | |||||| || || ||| Sbjct 8256 AAAGTGCGTCCGTCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGTTGATCTGGGGGA 8197 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| |||||||| || ||||||||| ||| || || || | | ||| || Sbjct 8196 ATACCCTCCTTATCTTGAATTTTAGCCTTGACGTTCTCAATAGTATCAGAAGGTTCGACC 8137 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || ||||||||||| || || || | |||||| ||||| || |||||| Sbjct 8136 TCTAAGGTGATGGTCTTGCCAGTTAAGGTCTTCACGAAGATTTGCATT 8089 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || || ||||| ||||| || || || |||||||||||||| |||||||| Sbjct 8772 CCTCCACGGAGACGTAATACTAAGTGAAGGGTAGATTCTTTTTGGATGTTGTAATCGGAC 8713 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | ||| | |||||||| || || || || ||||| || | | ||||| || || ||| Sbjct 8712 AATGTACGTCCATCTTCCAATTGTTTACCAGCGAAGATTAAACGCTGTTGATCTGGGGGA 8653 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| |||||||| || || || || ||| || || || || | | ||| || Sbjct 8652 ATACCTTCTTTGTCTTGGATTTTGGCTTTAACGTTTTCTATAGTATCCGAAGGTTCAACC 8593 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || || ||||||||||| | ||| || ||||| || ||||| Sbjct 8592 TCTAGTGTAATTGTTTTTCCCGTTAAGGTTTTAACGAAAATTTGCAT 8546 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || ||||| ||||| || || || |||||||||||||| || || || Sbjct 9000 CCACCACGGAGACGTAATACTAAGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGAC 8941 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | ||| | |||||||| || || || || || || || | | |||||| || || ||| Sbjct 8940 AATGTACGGCCATCTTCCAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGGGGA 8881 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| |||||||| || || ||||||||| || ||||| || | || || ||| Sbjct 8880 ATACCTTCTTTGTCTTGGATTTTAGCCTTGACGTTTTCAATGGTATCAGATGGCTCAACT 8821 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || |||||||| || || || || | ||||| || || || ||||| Sbjct 8820 TCTAAGGTGATAGTCTTGCCGGTTAAAGTCTTTACAAAAATTTGCAT 8774 Score = 127 bits (140), Expect = 4e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306 || |||||||| || | ||||| |||||||| || || ||||| || | ||| | ||| Sbjct 8532 CGTAATACCAAATGCAATGTGGATTCTTTTTGAATATTGTAATCAGACAATGTGCGCCCG 8473 Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 ||||| || || || || || || || | | |||||| || || || || ||||||||| Sbjct 8472 TCTTCCAATTGTTTGCCAGCAAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTG 8413 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426 |||||||| || || || || || || || || | | || || ||||| |||||| Sbjct 8412 TCTTGAATTTTAGCTTTTACATTTTCAATAGTATCGGAAGGCTCAACCTCCAAAGTGATG 8353 Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || || | |||||||| || || ||||| Sbjct 8352 GTTTTGCCAGTCAATGTCTTGACAAAGATTTGCAT 8318 Score = 116 bits (128), Expect = 7e-21 Identities = 99/122 (81%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399 ||||| || || ||||| ||||| |||||||| || ||||||||||| || |||||| Sbjct 10111 TGTTGATCTGGAGGAATACCTTCTTTGTCTTGGATTTTTGCCTTGACATTTTCAATGGTG 10052 Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459 || | || || |||||||||||||||||||| || || | |||||||||||| || ||| Sbjct 10051 TCGGATGGCTCAACTTCCAAGGTGATGGTTTTACCTGTCAAGGTCTTGACGAAGATTTGC 9992 Query 68460 AT 68461 || Sbjct 9991 AT 9990 >seq188148 Length=18106 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||| | |||||| |||| ||||| || ||||||||||| || ||||| Sbjct 3613 CCACCACGAAGGCGGAGTACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 3672 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| || || || |||||||| || | | |||||| || || || Sbjct 3673 AAGGTACGACCATCTTCCAATTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGGGGG 3732 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| |||||||| || || |||||||| || |||||||| | | || ||| Sbjct 3733 ATACCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTGTCGGAAGGCTCGACT 3792 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||| |||||||| || || | || |||||||| |||||||| Sbjct 3793 TCCAAGGTAATGGTTTTACCAGTTAAAGTTTTGACGAAGATCTGCAT 3839 >seq22680 Length=2395 Score = 147 bits (162), Expect = 4e-30 Identities = 159/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 68252 TACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTC 68311 ||||| |||| ||| || ||||||||||| || ||| || ||||| ||||| || Sbjct 792 TACCAGATGTAAGGTGCTTTCCTTTTGGATGTTGTAGTCGTTAAGGGTCCTTCCATCCTC 851 Query 68312 TAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTG 68371 | ||| || || |||||||| | |||||||||||| || || || ||||| |||||||| Sbjct 852 GAGCTGTTTACCTGCGAATATCAATCTTTGTTGGTCTGGAGGGATTCCTTCTTTGTCTTG 911 Query 68372 AATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTT 68431 |||||||| || ||| ||||| ||||||| ||| || ||||||| || || || Sbjct 912 GATCTTTGCTTTTACGTTTTCGATCGTGTCTGTGCTTTCGACCTCCAAGGCTATTGTCTT 971 Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||| || || || ||||| || || |||||| Sbjct 972 TCCTGTTAGTGTTTTGACAAAGATTTGCATT 1002 >seq185055 Length=12631 Score = 145 bits (160), Expect = 1e-29 Identities = 161/214 (75%), Gaps = 3/214 (1%) Strand=Plus/Plus Query 68227 TTTAATTT---CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGT 68283 |||||||| ||||||||||| || | ||||| || || || || || |||||||||| Sbjct 12415 TTTAATTTGCGCCTCCGCGAAGACGTAGCACCAAATGGAGAGTAGATTCCTTTTGGATGT 12474 Query 68284 TATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTT 68343 | || || || || || | ||||| ||||| || || || ||||| || | | ||||| Sbjct 12475 TGTAGTCAGACAGAGTACGGCCATCCTCTAATTGTTTGCCAGCGAAGATCAAACGTTGTT 12534 Query 68344 GGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTG 68403 | || || ||||||||||| || ||||| ||||| ||||| || || ||||| || | Sbjct 12535 GATCTGGGGGAATGCCTTCTTTATCTTGGATCTTAGCCTTAACATTTTCAATGGTATCGG 12594 Query 68404 CTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 || ||| |||||||| ||||| ||||| || || Sbjct 12595 ATGGTTCGACTTCCAAAGTGATAGTTTTGCCGGT 12628 >seq5262 Length=11329 Score = 138 bits (152), Expect = 2e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293 ||| || ||||| ||||| |||||||| | || || || ||||| || || || || || Sbjct 3151 TCCACCACGAAGACGCAAAACCAAGTGCAATGTCGATTCCTTTTGAATATTGTAGTCAGA 3210 Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 || || | |||||||| ||||| || || || || || | | ||| || || ||||| Sbjct 3211 AAGAGTACGACCATCTTCCAACTGTTTTCCAGCAAAAATTAAACGTTGCTGATCTGGTGG 3270 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 ||| || || ||||| |||||||| || || || || ||||| || | | ||| || Sbjct 3271 AATTCCCTCTTTGTCCTGAATCTTGGCTTTAACATTTTCAATGGTATCAGAAGGTTCGAC 3330 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | |||||||| || ||||| ||||| || || |||||||||||| Sbjct 3331 CTCAAGTGTGATGGTCTTACCCGTTAGGGTTTTAACAAATATCTGCATT 3379 >seq137448 Length=735 Score = 123 bits (136), Expect = 5e-23 Identities = 169/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| || || || | || | ||| || | |||| || ||| || || || |||| Sbjct 21 TTTATTTACCACCTCTCAGTCTCAACACAAGATGTAAAGTACTCTCCTTCTGTATATTAT 80 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 | || | |||||| ||||| || | ||||||||| || ||||| | |||||| |||| Sbjct 81 AGTCATTTAATGTCCTTCCATCCTCAAGCTGCTTCCCTGCAAATATCAATCTTTGCTGGT 140 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 | || || || ||||| ||||| || || || ||||| || ||| || || || | Sbjct 141 CAGGAGGTATCCCTTCTTTGTCCTGTATTTTCGCCTTTACATTCTCAATTGTATCACCCC 200 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||| |||||||| || || || ||||||||||| || ||||| || || |||||| Sbjct 201 CTTCAACTTCCAATGTAATTGTCTTTCCCGTGAGTGTTTTGACAAAGATTTGCATT 256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 919405206911200