Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq37119 86.0 2e-13 >seq37119 Length=7354 Score = 86.0 bits (94), Expect = 2e-13 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 3343 CGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTG 3402 || |||||||| | | |||| |||||| || |||||||| |||||||| || || | Sbjct 1736 CGTGTCTTTCCCAAAGTCACCAAATGTACATTCCACAAATATGGTCCTTCTGGTTCGGTT 1677 Query 3403 GAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATT 3462 |||| | ||| || ||||| | || || ||| | ||||| ||||| ||||| | Sbjct 1676 CAAAAGTTCGATGGTCTCTGTGTGCTGCCTTTGAATATTGTCAATGAGAAAATCTATGTC 1617 Query 3463 TTCCTCTGGTTCTGGTT 3479 ||||| ||||||||||| Sbjct 1616 TTCCTATGGTTCTGGTT 1600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12453729210000