Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq179592 105 5e-18 seq192427 104 2e-17 seq171761 104 2e-17 seq169872 104 2e-17 seq162097 104 2e-17 seq170 104 2e-17 seq77 104 2e-17 seq28 104 2e-17 seq175891 87.8 1e-12 >seq179592 Length=11241 Score = 105 bits (116), Expect = 5e-18 Identities = 74/82 (90%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||||||||||| || ||||||||||||| Sbjct 11215 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTTACGATCTAAGGAACC 11156 Query 115589 AAAACTGATATATTGAGCCATT 115610 | |||||||||| |||||| || Sbjct 11155 ATAACTGATATAATGAGCCTTT 11134 Score = 105 bits (116), Expect = 5e-18 Identities = 74/82 (90%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||||||||||| || ||||||||||||| Sbjct 11215 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTTACGATCTAAGGAACC 11156 Query 114392 AAAACTGATATATTGAGCCATT 114413 | |||||||||| |||||| || Sbjct 11155 ATAACTGATATAATGAGCCTTT 11134 >seq192427 Length=99138 Score = 104 bits (114), Expect = 2e-17 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| Sbjct 47575 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 47516 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619 | |||||||||| |||||| || | ||| || Sbjct 47515 ATAACTGATATAATGAGCCTTTTGCGGTTTC 47485 Score = 104 bits (114), Expect = 2e-17 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| Sbjct 47575 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 47516 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422 | |||||||||| |||||| || | ||| || Sbjct 47515 ATAACTGATATAATGAGCCTTTTGCGGTTTC 47485 Score = 84.2 bits (92), Expect = 2e-11 Identities = 76/92 (83%), Gaps = 3/92 (3%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCACGTTATCCAAGTAACTGAGTAAGATCTAAGGAA-CC 115588 |||||||| |||||||||||||||| |||||||||||||| | ||||||||||| || Sbjct 12010 CATGTATTAGCTCTAGAATTACCACAGTATCCAAGTAACTGTTAACGATCTAAGGAAGCC 11951 Query 115589 A-AAACTGATATATTGAGCCATTCGTGGTATC 115619 | |||||||||| ||||| || | ||| || Sbjct 11950 ATTAACTGATATAATGAGCTTTTTGCGGTTTC 11919 Score = 84.2 bits (92), Expect = 2e-11 Identities = 76/92 (83%), Gaps = 3/92 (3%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCACGTTATCCAAGTAACTGAGTAAGATCTAAGGAA-CC 114391 |||||||| |||||||||||||||| |||||||||||||| | ||||||||||| || Sbjct 12010 CATGTATTAGCTCTAGAATTACCACAGTATCCAAGTAACTGTTAACGATCTAAGGAAGCC 11951 Query 114392 A-AAACTGATATATTGAGCCATTCGTGGTATC 114422 | |||||||||| ||||| || | ||| || Sbjct 11950 ATTAACTGATATAATGAGCTTTTTGCGGTTTC 11919 >seq171761 Length=10880 Score = 104 bits (114), Expect = 2e-17 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| Sbjct 9993 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 10052 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422 | |||||||||| |||||| || | ||| || Sbjct 10053 ATAACTGATATAATGAGCCTTTTGCGGTTTC 10083 Score = 104 bits (114), Expect = 2e-17 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| Sbjct 9993 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 10052 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619 | |||||||||| |||||| || | ||| || Sbjct 10053 ATAACTGATATAATGAGCCTTTTGCGGTTTC 10083 >seq169872 Length=6882 Score = 104 bits (114), Expect = 2e-17 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| Sbjct 3399 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 3340 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619 | |||||||||| |||||| || | ||| || Sbjct 3339 ATAACTGATATAATGAGCCTTTTGCGGTTTC 3309 Score = 104 bits (114), Expect = 2e-17 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| Sbjct 3399 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 3340 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422 | |||||||||| |||||| || | ||| || Sbjct 3339 ATAACTGATATAATGAGCCTTTTGCGGTTTC 3309 >seq162097 Length=7526 Score = 104 bits (114), Expect = 2e-17 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| Sbjct 6169 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 6228 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422 | |||||||||| |||||| || | ||| || Sbjct 6229 ATAACTGATATAATGAGCCTTTTGCGGTTTC 6259 Score = 104 bits (114), Expect = 2e-17 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| Sbjct 6169 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 6228 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619 | |||||||||| |||||| || | ||| || Sbjct 6229 ATAACTGATATAATGAGCCTTTTGCGGTTTC 6259 >seq170 Length=11158 Score = 104 bits (114), Expect = 2e-17 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| Sbjct 7690 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 7749 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422 | |||||||||| |||||| || | ||| || Sbjct 7750 ATAACTGATATAATGAGCCTTTTGCGGTTTC 7780 Score = 104 bits (114), Expect = 2e-17 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| Sbjct 7690 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 7749 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619 | |||||||||| |||||| || | ||| || Sbjct 7750 ATAACTGATATAATGAGCCTTTTGCGGTTTC 7780 >seq77 Length=18294 Score = 104 bits (114), Expect = 2e-17 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| Sbjct 3257 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 3316 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422 | |||||||||| |||||| || | ||| || Sbjct 3317 ATAACTGATATAATGAGCCTTTTGCGGTTTC 3347 Score = 104 bits (114), Expect = 2e-17 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| Sbjct 3257 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 3316 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619 | |||||||||| |||||| || | ||| || Sbjct 3317 ATAACTGATATAATGAGCCTTTTGCGGTTTC 3347 >seq28 Length=10842 Score = 104 bits (114), Expect = 2e-17 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| Sbjct 2564 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 2505 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619 | |||||||||| |||||| || | ||| || Sbjct 2504 ATAACTGATATAATGAGCCTTTTGCGGTTTC 2474 Score = 104 bits (114), Expect = 2e-17 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||| Sbjct 2564 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACC 2505 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422 | |||||||||| |||||| || | ||| || Sbjct 2504 ATAACTGATATAATGAGCCTTTTGCGGTTTC 2474 >seq175891 Length=10111 Score = 87.8 bits (96), Expect = 1e-12 Identities = 154/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || || |||| |||||| || || || |||||||||||||| | ||| || Sbjct 8307 AGACGTAGAACCAAATGAAGTGTAGATTCTTTTTGAATGTTGTAATCGGACAAAGTGCGT 8248 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 |||| |||||||| || |||||||| |||| || || ||||| || | | ||| Sbjct 8247 CCGTCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGTTGATCTGGGGGAATACCCTCC 8188 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGCATTCGACCGT 34088 || || |||||| ||| | | ||| | | |||||| || |||| || | || Sbjct 8187 TTATCTTGAATTTTAGCCTTGA-CGTTCTCAATAGTATCAGAAGGTTCGACCTCTAAGGT 8129 Query 34089 TATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTT 34130 || || || || |||| || ||||| |||||||||||||| Sbjct 8128 GATGGTCTTGCCAGTTAAGGTCTTCACGAAGATTTGCATTTT 8087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396131047952920