Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq175891 143 6e-29 seq185055 120 7e-22 seq22680 118 2e-21 seq5262 114 3e-20 seq191265 91.5 3e-13 seq137448 89.7 1e-12 >seq175891 Length=10111 Score = 143 bits (158), Expect = 6e-29 Identities = 149/194 (77%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| ||||| |||| | |||||||||||||| |||||||| || ||||| Sbjct 9648 TCCTTTTGGATGTTATAATCGGACAAAGTGCGTCCGTCTTCCAATTGTTTACCAGCGAAA 9589 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| ||| |||||| ||||| || ||||||||||| |||||||| || || || Sbjct 9588 ATCAAACGTTGTTGA---TCTGGAGGAATACCTTCTTTATCTTGGATTTTTGCCTTGACA 9532 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 ||||| || | |||| | || ||||| | ||||| ||||| ||||||| || ||| Sbjct 9531 TTTTCAATGGTATCGGATGGCTCAACTTCCAAAGTGATAGTCTTGCCGGTCAAGGTTTTG 9472 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 9471 ACGAAGATTTGCAT 9458 Score = 136 bits (150), Expect = 9e-27 Identities = 148/195 (76%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||||||||| || || |||| | || ||||| ||||| |||||||| || ||||| Sbjct 8737 TTCTTTTTGGATGTTGTAATCGGACAATGTACGTCCATCTTCCAATTGTTTACCAGCGAA 8678 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||| | |||||||||| |||||| || |||||||| || |||||||| ||||| || Sbjct 8677 GATTAAACGCTGTTGA---TCTGGGGGAATACCTTCTTTGTCTTGGATTTTGGCTTTAAC 8621 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||||||||| ||| | ||| || || || || || || || || || | || || Sbjct 8620 GTTTTCTATAGTATCCGAAGGTTCAACCTCTAGTGTAATTGTTTTTCCCGTTAAGGTTTT 8561 Query 288459 GACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 8560 AACGAAAATTTGCAT 8546 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | | ||| | |||| || |||||||||||| || ||||| | Sbjct 9000 CCACCACGGAGACGTAATACTAAGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGAC 8941 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || ||||| |||||||| || || ||||| | ||| ||||| ||||||| Sbjct 8940 AATGTACGGCCATCTTCCAATTGTTTACCAGCAAAGATTAAACGTTGTTG---ATCTGGG 8884 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || |||||||| || |||||||| || || |||||||| || | ||| | || Sbjct 8883 GGAATACCTTCTTTGTCTTGGATTTTAGCCTTGACGTTTTCAATGGTATCAGATGGCTCA 8824 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | ||||| ||||| ||||| | |||||| || || || ||||| Sbjct 8823 ACTTCTAAGGTGATAGTCTTGCCGGTTAAAGTCTTTACAAAAATTTGCAT 8774 Score = 125 bits (138), Expect = 2e-23 Identities = 167/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || | ||||| || ||||||||| || || || |||| Sbjct 8316 CCACCACGAAGACGTAGAACCAAATGAAGTGTAGATTCTTTTTGAATGTTGTAATCGGAC 8257 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | |||||||||||||| |||||||| || || || |||| ||| ||||| ||||||| Sbjct 8256 AAAGTGCGTCCGTCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGTTG---ATCTGGG 8200 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || ||||| || ||||| || || ||||| || |||| ||| | ||| Sbjct 8199 GGAATACCCTCCTTATCTTGAATTTTAGCCTTGACGTTCTCAATAGTATCAGAAGGTTCG 8140 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || | ||||| ||||| || || | ||||| ||||| || |||||| Sbjct 8139 ACCTCTAAGGTGATGGTCTTGCCAGTTAAGGTCTTCACGAAGATTTGCATT 8089 Score = 123 bits (136), Expect = 6e-23 Identities = 156/213 (73%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 288264 TACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTC 288323 ||| | ||| | ||| ||||||||| ||||| || || | | ||||| |||||||| Sbjct 8527 TACCAAATGCAATGTGGATTCTTTTTGAATATTGTAATCAGACAATGTGCGCCCGTCTTC 8468 Query 288324 TAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATC 288380 |||||||| || || || |||| ||| |||||| |||||| |||||||| || || Sbjct 8467 CAATTGTTTGCCAGCAAAAATCAAACGTTGTTGA---TCTGGGGGGATTCCTTCCTTGTC 8411 Query 288381 CTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGT 288440 || ||||| ||||| || ||||| |||| |||| | || || || | ||||| || Sbjct 8410 TTGAATTTTAGCTTTTACATTTTCAATAGTATCGGAAGGCTCAACCTCCAAAGTGATGGT 8351 Query 288441 CTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || |||| |||||||| || || ||||| Sbjct 8350 TTTGCCAGTCAATGTCTTGACAAAGATTTGCAT 8318 Score = 118 bits (130), Expect = 2e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| ||||| |||| | || ||||| ||||| || || || || ||||| Sbjct 9421 TTCCTTTTGGATGTTATAATCGGACAAAGTACGTCCATCTTCCAACTGCTTACCGGCGAA 9362 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| ||| || ||| ||||| || ||||||||||| || ||||| || || || Sbjct 9361 AATCAAACGTTGCTGA---TCTGGAGGAATACCTTCTTTATCTTGAATTTTAGCCTTGAC 9305 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||| || | ||| | |||||||| | || || ||||| ||||||| ||||| Sbjct 9304 ATTTTCAATGGTATCAGATGGCTCTACTTCCAAGGTAATGGTCTTGCCGGTCAAGGTCTT 9245 Query 288459 GACGAATATCTGCAT 288473 |||||| || ||||| Sbjct 9244 GACGAAGATTTGCAT 9230 Score = 109 bits (120), Expect = 1e-18 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| ||||| || | | || ||||| ||||| || || || || ||||| Sbjct 9193 TTCCTTTTGGATGTTATAATCAGACAATGTACGTCCATCTTCCAACTGCTTACCGGCGAA 9134 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| ||| ||||| |||||| || ||||| |||||||||||||| || || || Sbjct 9133 AATCAAACGTTGTTGG---TCTGGGGGAATACCTTCCTTATCCTGGATTTTAGCCTTTAC 9077 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || ||||||| ||| | |||||||| | ||||| || || || |||| || || Sbjct 9076 ATTCTCTATAGTATCAGATGGCTCTACTTCCAAGGTGATAGTTTTTCCAGTCAAGGTTTT 9017 Query 288459 GACGAATATCTGCAT 288473 || || || ||||| Sbjct 9016 CACAAAGATTTGCAT 9002 >seq185055 Length=12631 Score = 120 bits (132), Expect = 7e-22 Identities = 131/173 (76%), Gaps = 6/173 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||| | || || || || || ||||||||||| || ||||| Sbjct 12461 TTCCTTTTGGATGTTGTAGTCAGACAGAGTACGGCCATCCTCTAATTGTTTGCCAGCGAA 12520 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||||| ||| ||||| ||||||| || ||||||||||| ||||| || || || || Sbjct 12521 GATCAAACGTTGTTG---ATCTGGGGGAATGCCTTCTTTATCTTGGATCTTAGCCTTAAC 12577 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCA 288451 ||||| || | |||| | ||| ||||| | ||||| || || ||||||| Sbjct 12578 ATTTTCAATGGTATCGGATGGTTCGACTTCCAAAGTGATAGTTTTGCCGGTCA 12630 >seq22680 Length=2395 Score = 118 bits (130), Expect = 2e-21 Identities = 160/222 (72%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 ||||| ||||| ||||| | |||||||| |||||||| || |||||| || || | | Sbjct 784 AGTCTTAGTACCAGATGTAAGGTGCTTTCCTTTTGGATGTTGTAGTCGTTAAGGGTCCTT 843 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG---GATTCCT 288372 || || || | ||||| |||||||| |||| | ||||| ||||| ||||||| Sbjct 844 CCATCCTCGAGCTGTTTACCTGCGAATATCAATCTTTGTTGG---TCTGGAGGGATTCCT 900 Query 288373 TCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGC 288432 ||||| || ||||| || ||||| |||||||| || | || | ||| || || | Sbjct 901 TCTTTGTCTTGGATCTTTGCTTTTACGTTTTCGATCGTGTCTGTGCTTTCGACCTCCAAG 960 Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 | || ||||| || || || || ||||| || || |||||| Sbjct 961 GCTATTGTCTTTCCTGTTAGTGTTTTGACAAAGATTTGCATT 1002 >seq5262 Length=11329 Score = 114 bits (126), Expect = 3e-20 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| ||||| ||||| | || || || || ||||| || |||||||| || || Sbjct 3187 TTCCTTTTGAATATTGTAGTCAGAAAGAGTACGACCATCTTCCAACTGTTTTCCAGCAAA 3246 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || | ||| || ||| ||| ||||| ||||| ||||| || || ||||| || || Sbjct 3247 AATTAAACGTTGCTGATCTGGTGGAATTCCCTCTTTGTCCTGAATCTTGGCTTTAACATT 3306 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || | ||| | ||| || || || ||||| ||||| || || || || || || Sbjct 3307 TTCAATGGTATCAGAAGGTTCGACCTCAAGTGTGATGGTCTTACCCGTTAGGGTTTTAAC 3366 Query 288462 GAATATCTGCATT 288474 |||||||||||| Sbjct 3367 AAATATCTGCATT 3379 >seq191265 Length=39239 Score = 91.5 bits (100), Expect = 3e-13 Identities = 192/281 (68%), Gaps = 8/281 (3%) Strand=Plus/Minus Query 72514 TGTACGCTTATTGGATCTGTAAAAATTACCGTGAGTCGTATAACATGTATGTATGCAACT 72573 |||| | || ||||| || ||| || ||||| | || || |||| || ||||| Sbjct 18224 TGTATGGTTTCTGGATTGTTATAAACTATCGTGAAGCCTACAATATGTTTGCCTGCAATG 18165 Query 72574 CGATTTGTTTCAATCACGAGAGTCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCA 72633 || ||||||||||| || | ||||| | | || ||||| |||||||| | Sbjct 18164 GTATACTCTTCAATCACGAATCACCTAGAAGAGGTGAAAATTTTGTGACACGTAAAATTA 18105 Query 72634 CGAAGGT-GGTCGCGAATATTT---TCAATGGTGTCGAAAAATGCATGTATCTCGGTAAT 72689 | | | | || || || |||| ||||| | ||| | | || || | |||||| Sbjct 18104 C-ACGTTCCGTTGCCAAGATTTATCTCAATCAATTGGAATATT--TTGAAT-TGGGTAAT 18049 Query 72690 ATAGATGCCAAAAGAGATTGGGGATATGCGAAGGATTACGTAGAAGCAATGTGGTTGATG 72749 ||||| | ||| | |||||||| |||| | |||||| ||||| || |||||| ||||| Sbjct 18048 TTAGATTCAAAACGTGATTGGGGCCATGCCATGGATTATGTAGAGGCTATGTGGATGATG 17989 Query 72750 CTGCAACAAGATACTCCGGATGACTATGTGATTGCAACAGG 72790 |||||| ||||| || |||||||| ||||| || || Sbjct 17988 TTGCAACGTGATACACCCTCGGACTATGTCATTGCCACTGG 17948 >seq137448 Length=735 Score = 89.7 bits (98), Expect = 1e-12 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||| | || || || || || ||||||||||| Sbjct 29 CCACCTCTCAGTCTCAACACAAGATGTAAAGTACTCTCCTTCTGTATATTATAGTCATTT 88 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCT 288363 | || | ||| || || | || || ||||| || |||| | |||| | || | Sbjct 89 AATGTCCTTCCATCCTCAAGCTGCTTCCCTGCAAATATCAATCTTTGCTGGTCAGGA--- 145 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || |||||||| ||||| |||||||| || || || || || | ||| | | ||| Sbjct 146 GGTATCCCTTCTTTGTCCTGTATTTTCGCCTTTACATTCTCAATTGTATCACCCCCTTCA 205 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| | || || ||||| || || || || ||||| || || |||||| Sbjct 206 ACTTCCAATGTAATTGTCTTTCCCGTGAGTGTTTTGACAAAGATTTGCATT 256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176745497587880