Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq31717 91.5 2e-13 seq172236 89.7 6e-13 >seq31717 Length=19532 Score = 91.5 bits (100), Expect = 2e-13 Identities = 125/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 171907 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTGATATT 171966 ||||||||||||| | | ||| || || |||||||| | || || || | |||||| || Sbjct 6957 ATCTTTGCCACCCGTTAAACGAGTACCGAATTGACCTCTAGGCTCTAGCAAATTGATGTT 7016 Query 171967 GTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAGACTTCAC 172025 || ||||||| || | | || || || ||||| || || | || |||||||||| Sbjct 7017 ATTAGAACCCACATAATTTTGAGCTAAATTAACAATAGTCATTTG-TAGAGAGACTTCAC 7075 Query 172026 CGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAACTGTGCCACCTT 172077 | ||||||||||| ||| | || || ||| | | | ||| || || ||||| Sbjct 7076 CATGATGGTAGGCAGACATTTCAGCAACAGAACCGGACAATTGAGCAACCTT 7127 >seq172236 Length=40455 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 10960 ACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAACTTC 11019 ||| || || ||||||||||||||||| | ||||| || ||||| || || | | | Sbjct 10227 ACCCACAGCATCAATTTCATCGATGAACAAAATACAAGGAGCATTTTTTCGTGCCATTGC 10168 Query 11020 AAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGGC 11079 || |||||||| ||||| | || ||||||||||||||||||| || | | | Sbjct 10167 GAACATATCTCGCACTCTAGAAGGGCCAACACCCACAAACATTTCCAAGAACTCAGAACC 10108 Query 11080 GGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTT 11139 |||| || || || || |||| ||| || ||| ||||| || || | ||||| Sbjct 10107 GGAAACGGTAATAAAAGGTACATTGGCTTCTCCAGCGGTGGCTTTAGCAAGTAAAGTCTT 10048 Query 11140 CCCCGTCCCAGG 11151 ||||| ||||| Sbjct 10047 TCCCGTACCAGG 10036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595916516576800