Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq173136 150 2e-31 seq175891 123 2e-23 seq137448 104 2e-17 >seq173136 Length=30018 Score = 150 bits (166), Expect = 2e-31 Identities = 858/1372 (63%), Gaps = 25/1372 (2%) Strand=Plus/Minus Query 153675 TCCACGGTAAATGCGATTGCATCCGCGGCCGGTTTAGTTCGCAAATAATACATGCCGGTT 153734 || || |||||| || |||| ||||| ||||| |||| ||||| ||||||||||| Sbjct 3881 TCTACAGTAAATTGTATAGCATTGGCGGCTGGTTTTGTTCTTAAATAGTACATGCCGGTC 3822 Query 153735 TTCAAACCACGTTTCCAAGTGTGCATGTGCACGCTAGTTAATAACGCGAAACTGGGCTGC 153794 || || ||| ||||||| | | || | |||||| || || | || | Sbjct 3821 TTTAAGCCAGCCTTCCAAGAATAGAAATGTATAGAGGTTAATTTACCGTAATTAGGTTCA 3762 Query 153795 GCTATAAACACGTTAAACGACTGGCTCTGATCGATGAAAGCGCCGCGATCGGCCGCCATG 153854 |||| | |||||| || || || ||||| ||||||||||| |||||||| ||||| Sbjct 3761 GCTACGTGTATGTTAAAGGATTGACTTTGATCTATGAAAGCGCCACGATCGGCGGCCATT 3702 Query 153855 TCAATCAAGTTTTTACTGCTCATTTCCCACACAGTTTTGTAGACGGCTTTAATGTCGTCG 153914 | ||| | | || | |||||||| || || || || | | | ||| | | | Sbjct 3701 TTAATTGTGCTCTTGACGGAAATTTCCCAAACTGTCTTATAAAGGTCACGAATATTTTTG 3642 Query 153915 GGTATGCGATCAATTTTCTGCACACTGCCTCCGGCCGCTATAATGGAATTGCGCATGTGG 153974 || || || || || | | || | | |||||| ||| ||| | Sbjct 3641 GGAATTTCTTCTATGGCTTGTATAGATCCGCGATTGGATATAATTTTATTTTTCATATTA 3582 Query 153975 TCGTCGTACAAATTTAGTCGACATAAATCTTCAACCAAGTGCTGGTTAATTACTTGAAAA 154034 || || |||||| ||| |||||||| | || || || |||| || | || Sbjct 3581 TCATCCCACAAATCAAGTTCTGTTAAATCTTTCAATAAATGATGATTAACAACATTGAAT 3522 Query 154035 TCGCCGGCCAATACGCGGCGCACATACAAATTGCTGGTGAACGGCTCGAACGATTCGTTG 154094 || || | | || || || ||| | || || | || || || ||||| || Sbjct 3521 TCTCCTGATAGCACACGTCGGGTATATATGTTAGAAGTATAAGGTTCAAATGATTCATTA 3462 Query 154095 TTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATATACGCCACCAACAAAGAGTTTCGC 154154 ||||| || || ||||| |||| |||||| ||||| || | | ||||||||| || Sbjct 3461 TTGCCCAAAATCTGAGCGGTAGATGCTGTAGGCATGGGAGCAATAAGCAAAGAGTTACGT 3402 Query 154155 AAACCGTGTT--TTGCAATGCGCAATTTTAAATCTGCCCAATTCCACAAGTTGGTAGGTT 154212 | ||| |||| ||| | | |||||| | | ||||| |||||||| |||||| Sbjct 3401 ACACCATGTTGCTTGATTTTTTC--TTTTAATGCCGACCAATCCCACAAGTCAGTAGGTG 3344 Query 154213 GCACGTTCCACATGTCGTATTGCAAAACACCCAAACTCGCCGGACTGTCACTATAACTAG 154272 |||||||| || ||||| | | || || | |||| | | ||| | Sbjct 3343 TTTTATTCCACATATCATATTGTAGTATTCCTTTGCTAACTGGACAGCCGGGATAGGTTT 3284 Query 154273 AGTACGGCCCGTTCAGTTTTGCCAAGTCGCAACTGGCTTCTAACGCCGCATAGTATACGG 154332 || | || | || |||||| || |||||||| ||||| || |||| || | || Sbjct 3283 CATATGTACCATATTTTTCTGCCAATTCACAACTGGCCTCTAAGGCACCATAATAAATGG 3224 Query 154333 TTTCGGCAATTTGTTTGTTTAACATTTTGGCTTTGTCACTTTCGTACGGCAATCCCAATA 154392 |||| ||||||| ||| || | ||| | ||||| || || || || | || || Sbjct 3223 TTTCAAATATTTGTTGGTTCAATAAAAAGGCCTGTTCACTCTCATAGGGGAAGCGCATTA 3164 Query 154393 TACAAAAAGCATCGGCGAGCCCTTGAATGCCCACTCCAACGGGTCTGTGTTTTAAATTCG 154452 | |||| ||| || | || || | || | |||| ||| | || | ||| | Sbjct 3163 AAATCAAAGTATCAGCAAAACCCTGGACACCTATACCAATGGGGCGATGACGCAGATTAG 3104 Query 154453 ATT-CTTTGGCAGCCTC---CAGAGGATAATAATTGATATCGATAATTTTATTTANNNNN 154508 ||| ||||| |||| ||| ||||||||||| || || ||||||||||||| Sbjct 3103 ATTTCTTTG----CCTCTGGCAGGGGATAATAATTTATGTCTATAATTTTATTTAAATTC 3048 Query 154509 NNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCGACAAAATCAAACA----CTCCGCTTTT 154564 || ||| || || ||| | | | Sbjct 3047 CTGGTAATAACTTTAGTAACATTTTTCAATTTCTTAAAGTCGAATGTTTTCTCAGGTGT- 2989 Query 154565 AATAAAACGATTTA-CACACACAGACGCCAAGTTGCAAACGGCAATTTCTTCAGAACTAC 154623 || ||| ||| | | || | || ||||| || |||||||| ||||| || | | Sbjct 2988 AACAAACATATTAAGCGCA-ATGGAGGCCAAATTACAAACGGCTATTTCATCGGGGGCAG 2930 Query 154624 TGTATTGCACAATTTCTGCGCACAAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGAT 154683 |||| |||||||||| |||| || |||||| ||| ||||| | |||| ||| | Sbjct 2929 AATATTCTACAATTTCTGTACACAGGTTGCTGCATTTAATAGTGCCTATATTTTGCTGGT 2870 Query 154684 TCGATTTGATGTTGCATGCGTCTTTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGG 154743 | ||| || || || || ||||| || ||||| || || || ||||| ||||||| Sbjct 2869 TACTCTTGCGATTACAGGCATCCTTGTATAACATGTAGGGTGTACCAGTTTCTACTTGGG 2810 Query 154744 TTTCAATAATTGTG--CGAAACAGACTTCGCGCCTCAACTTGACAAGTAAATCGATTTTC 154801 ||||| || | | | | || || | |||| ||| | | || | ||| Sbjct 2809 CCTCAATGATGGCAAACCATAGAGCCT--GTGCCTTAACAGTGCGATTAGCTTTGCCTTC 2752 Query 154802 GCTCTCATA-TTGTTCGTACAGTTTTTCAAACTCTAAACTGTACACGTCCGACAAACCGG 154860 | ||||| ||| | |||| | |||||||||| || | || ||| || |||| Sbjct 2751 TTTTTCATACTTGGTA-TACAACTGTTCAAACTCTTCACCCCAGACATCCTGCAGGCCGG 2693 Query 154861 GACAGCGGTCGGGACACATCAATGACCACATTTCGTTTTGTTGTACGCGTTTCATAAACA 154920 |||| | ||||||||| || ||||| |||||| || ||| | ||||||||||| Sbjct 2692 GACATTTATGGGGACACATTAAGGACCAGTCACCGTTTTCTTCTACTCTTTTCATAAACA 2633 Query 154921 AATCCGGCACCCACAAAGCGTACAACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGT 154980 | || || | ||| ||||| || || | ||| | || | | ||||| || | | Sbjct 2632 AGTCGGGAATCCATAAAGCATAAAAAAGATCTCTAGCTCTGTGCTCTTCTTTACCAGTAT 2573 Query 154981 TTCGCTTTAAATTCAAAAAATCATATATGTCGGCGTGCCACGGCTCTAAATA 155032 || |||||||| ||||| ||| | || || | ||||| || || ||||| Sbjct 2572 TTTTCTTTAAATCTAAAAATTCAAAAATATCTGAATGCCAAGGTTCCAAATA 2521 >seq175891 Length=10111 Score = 123 bits (136), Expect = 2e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||| ||||| ||||| ||||| | | || || | ||||| | |||| Sbjct 9432 TGAAGGGTAGATTCCTTTTGGATGTTATAATCGGACAAAGTACGTCCATCTTCCAACTGC 9373 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || ||||| |||| | || ||||| || |||||||| |||||||| ||||| ||||| Sbjct 9372 TTACCGGCGAAAATCAAACGTTGCTGATCTGGAGGAATACCTTCTTTATCTTGAATTTTA 9313 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| ||| || | |||||| | || ||||| | || | ||||||||||||| Sbjct 9312 GCCTTGACATTTTCAATGGTATCAGATGGCTCTACTTCCAAGGTAATGGTCTTGCCGGTC 9253 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 || || || ||||| |||||||| Sbjct 9252 AAGGTCTTGACGAAGATTTGCAT 9230 Score = 122 bits (134), Expect = 9e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || | ||||| || ||||||||||||||||||||||| | | ||||| ||||| Sbjct 8301 AGAACCAAATGAAGTGTAGATTCTTTTTGAATGTTGTAATCGGACAAAGTGCGTCCGTCT 8242 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | || || |||||| |||| | || || || || || ||||| || || || ||| Sbjct 8241 TCCAATTGTTTACCGGCAAAAATCAAACGTTGTTGATCTGGGGGAATACCCTCCTTATCT 8182 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| ||| || ||| | |||||| | || || |||| || | |||| Sbjct 8181 TGAATTTTAGCCTTGACGTTCTCAATAGTATCAGAAGGTTCGACCTCTAAGGTGATGGTC 8122 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||||| || || || || ||||| ||||||||||| Sbjct 8121 TTGCCAGTTAAGGTCTTCACGAAGATTTGCATTTT 8087 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || || || ||||| ||||| ||||| | | ||||| ||||||| | || Sbjct 9660 TGAAGGGTAGACTCCTTTTGGATGTTATAATCGGACAAAGTGCGTCCGTCTTCCAATTGT 9601 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || || |||| | || || || || |||||||| |||||||| ||||| |||||| Sbjct 9600 TTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCTTTATCTTGGATTTTT 9541 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| ||| || | ||||| | || ||||| | ||| | |||||||||||| Sbjct 9540 GCCTTGACATTTTCAATGGTATCGGATGGCTCAACTTCCAAAGTGATAGTCTTGCCGGTC 9481 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 || ||||| ||||| |||||||| Sbjct 9480 AAGGTTTTGACGAAGATTTGCAT 9458 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || |||||||||||||| |||||||| | | |||||| ||||||| | || ||||| Sbjct 8514 GTGGATTCTTTTTGAATATTGTAATCAGACAATGTGCGCCCGTCTTCCAATTGTTTGCCA 8455 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| | || || || || || || |||||||| || ||||| ||||| ||| Sbjct 8454 GCAAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTGTCTTGAATTTTAGCTTTT 8395 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | ||||| | || || || | ||| | ||| ||||| ||||| || Sbjct 8394 ACATTTTCAATAGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTGCCAGTCAATGTC 8335 Query 64427 TTTACGAAAATTTGCAT 64443 || || || |||||||| Sbjct 8334 TTGACAAAGATTTGCAT 8318 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 |||| |||| || ||||||||||| |||||||| || | | || || | ||||| Sbjct 8982 ACTAAGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGACAATGTACGGCCATCTTCC 8923 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 | || || || ||| | || | || || || || || ||||| |||||||| ||||| Sbjct 8922 AATTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGGGGAATACCTTCTTTGTCTTGG 8863 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414 ||||| ||| || || | |||||| | || ||||||| || | |||||| Sbjct 8862 ATTTTAGCCTTGACGTTTTCAATGGTATCAGATGGCTCAACTTCTAAGGTGATAGTCTTG 8803 Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| ||||| ||||| ||||||||||| Sbjct 8802 CCGGTTAAAGTCTTTACAAAAATTTGCAT 8774 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 |||| |||| || ||||||||||| ||||||||||| | | || || | ||||| Sbjct 8754 ACTAAGTGAAGGGTAGATTCTTTTTGGATGTTGTAATCGGACAATGTACGTCCATCTTCC 8695 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 | || || || || | || | ||||| || || || ||||| |||||||| ||||| Sbjct 8694 AATTGTTTACCAGCGAAGATTAAACGCTGTTGATCTGGGGGAATACCTTCTTTGTCTTGG 8635 Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 | |||| ||||| || || | ||||| | || || |||| || | || || Sbjct 8634 A-TTTTGGCTTTAACGTTTTCTATAGTATCCGAAGGTTCAACCTCTAGTGTAATTGTTTT 8576 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || ||||| |||||||||||||| Sbjct 8575 TCCCGTTAAGGTTTTAACGAAAATTTGCAT 8546 >seq137448 Length=735 Score = 104 bits (114), Expect = 2e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 || ||||||||||| || ||| | || | | |||||||| ||||| || |||||||| Sbjct 101 TCCTCAAGCTGCTTCCCTGCAAATATCAATCTTTGCTGGTCAGGAGGTATCCCTTCTTTG 160 Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 || |||||||| ||||||| ||| | ||||||||| | || ||||| | || | Sbjct 161 TCCTGTATTTTCGCCTTTACATTCTCAATTGTATCACCCCCTTCAACTTCCAATGTAATT 220 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTT 64445 ||||| || || | ||||| || || |||||||||| Sbjct 221 GTCTTTCCCGTGAGTGTTTTGACAAAGATTTGCATTT 257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498442779522400