Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq173136 125 7e-24 seq188148 120 3e-22 seq175891 104 2e-17 seq5262 89.7 5e-13 seq22680 84.2 2e-11 >seq173136 Length=30018 Score = 125 bits (138), Expect = 7e-24 Identities = 444/683 (65%), Gaps = 23/683 (3%) Strand=Plus/Minus Query 153085 AAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACG 153144 |||||||||| ||||| |||||||| | || ||||| || | ||| || |||||| | Sbjct 3481 AAGGTTCAAATGATTCATTATTGCCCAAAATCTGAGCGGTAGATGCTGTAGGCATGGGAG 3422 Query 153145 CCACCAACAAAGAATTCCGCAAGCCGTGC-GCTCGAATGTCGTCCTTCAACGCCTGCCAA 153203 | | | |||||| || || | || || ||| || | | || || || ||| |||| Sbjct 3421 CAATAAGCAAAGAGTTACGTACACCATGTTGCTTGATTTTT-TCTTTTAATGCCGACCAA 3363 Query 153204 TCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCG 153263 ||||||| | | ||||| |||||||| || || |||| | |||| || | Sbjct 3362 TCCCACAAGTCAGTAGGTGTTTTATTCCACATATCATATTGTAGTATTCCTTTGCTAACT 3303 Query 153264 GGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCG 153323 |||| ||||| | | || || | || | || |||| ||| || || ||||| Sbjct 3302 GGACAGCCGGGATAGGTTTCATATGTACCATATTTTTCTGCCAATTCACAACTGGCCTCT 3243 Query 153324 AGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATT---GAGAACGGCCGCTTCTTCG 153380 | || ||||| || |||||||| ||||||| || | || |||| | ||| Sbjct 3242 AAGGCACCATAATAAATGGTTTCAAATATTTGTTGGTTCAATAAAAAGGCC---TGTTCA 3186 Query 153381 CTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCG 153440 ||||| || || | ||||| | | || | || || | |||||||| ||| | || Sbjct 3185 CTCTCATAGGGGAAGCGCATTAAAATCAAAGTATCAGCAAAACCCTGGACACCTATACCA 3126 Query 153441 ATGGGTCGATGCTTC----TCG-TTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGC 153495 ||||| ||||| | | | || || ||||| || | |||||| | ||| Sbjct 3125 ATGGGGCGATGACGCAGATTAGATTTCTTTGCCTCTGGC-----AGGGGATAATAATTTA 3071 Query 153496 GATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGA 153555 || |||||||| || | || | | |||||||| | || | ||||| | Sbjct 3070 TGTCTATAATTTTATTTAAATTCCTGGTAATAACTTTAGTAACATTTTTCAATTTCTTAA 3011 Query 153556 AATCATAGGTCATTTCGTCGACGCGT-ACGCATCGATTCACGGCAATAGACGCCAGATTA 153614 | || | || |||| || | | || || | ||| | ||||| || |||| |||| Sbjct 3010 AGTCGAATGT--TTTC-TC-AGGTGTAACAAACATATTAAGCGCAATGGAGGCCAAATTA 2955 Query 153615 CAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCAT 153674 || ||||| | || |||| | | || | || || || | || |||||||||||| Sbjct 2954 CAAACGGCTATTTCATCGGGGGCAGAATATTCTACAATTTCTGTACACAGGTTGCTGCAT 2895 Query 153675 TTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATG 153734 || || ||| | ||||||||| || || |||||||| || || || ||| | | |||| Sbjct 2894 TTAATAGTGCCTATATTTTGCTGGTTACTCTTGCGATTACAGGCATCCTTGTATAACATG 2835 Query 153735 TACGGTCCGCCGGTCTCGACTTG 153757 || ||| || || || ||||| Sbjct 2834 TAGGGTGTACCAGTTTCTACTTG 2812 >seq188148 Length=18106 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 || ||||||| | || |||||||| |||||||||||| || ||||| || || Sbjct 3631 ACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTACGACCATCTTCC 3690 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 | ||||||||||| |||| | ||| ||||| || || || |||||||||||||| | Sbjct 3691 AATTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGGGGGATACCTTCTTTGTCTTGG 3750 Query 138526 ATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTA 138585 ||||| || | | ||| | |||||||| | ||| || || | || | |||||| Sbjct 3751 ATTTTAGCCTTGACATTTTCAATGGTGTCGGAAGGCTCGACTTCCAAGGTAATGGTTTTA 3810 Query 138586 CCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | |||||| || || |||||||| Sbjct 3811 CCAGTTAAAGTTTTGACGAAGATCTGCAT 3839 >seq175891 Length=10111 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| || ||||| || | | | || || ||||| ||||||||||| | Sbjct 9000 CCACCACGGAGACGTAATACTAAGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGAC 8941 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || | ||||||||| | | |||||| ||| ||||| || || || Sbjct 8940 AATGTACGGCCATCTTCCAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGGGGA 8881 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||||||||| |||||| || | | ||| | ||| || | | ||| || Sbjct 8880 ATACCTTCTTTGTCTTGGATTTTAGCCTTGACGTTTTCAATGGTATCAGATGGCTCAACT 8821 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || || | ||| ||||||||||| ||||| Sbjct 8820 TCTAAGGTGATAGTCTTGCCGGTTAAAGTCTTTACAAAAATTTGCAT 8774 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||||||||| || || | | | ||||||||||| ||||| || ||| | Sbjct 9684 CCACCACGGAGACGCAAAACCAAGTGAAGGGTAGACTCCTTTTGGATGTTATAATCGGAC 9625 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||| || | ||||||||| | | || | ||| ||||| || ||||| Sbjct 9624 AAAGTGCGTCCGTCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 9565 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||||||||| || ||||||| || | | ||| | ||| |||| | ||| || Sbjct 9564 ATACCTTCTTTATCTTGGATTTTTGCCTTGACATTTTCAATGGTATCGGATGGCTCAACT 9505 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || |||| ||||| || || || ||||| Sbjct 9504 TCCAAAGTGATAGTCTTGCCGGTCAAGGTTTTGACGAAGATTTGCAT 9458 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| || ||||| || | | | || || ||||| |||||||| ||| | Sbjct 8772 CCTCCACGGAGACGTAATACTAAGTGAAGGGTAGATTCTTTTTGGATGTTGTAATCGGAC 8713 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || | ||||||||| | |||||| ||||||||| || || || Sbjct 8712 AATGTACGTCCATCTTCCAATTGTTTACCAGCGAAGATTAAACGCTGTTGATCTGGGGGA 8653 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||||||||| |||||| ||| | | ||| | || || | | || ||| Sbjct 8652 ATACCTTCTTTGTCTTGGATTTTGGCTTTAACGTTTTCTATAGTATCCGAAGGTTCAACC 8593 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || | || | ||||| || || | ||||| || ||||| |||||| Sbjct 8592 TCTAGTGTAATTGTTTTTCCCGTTAAGGTTTTAACGAAAATTTGCATG 8545 >seq5262 Length=11329 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||||||||| || || | | || ||||||||||| |||||||| Sbjct 3152 CCACCACGAAGACGCAAAACCAAGTGCAATGTCGATTCCTTTTGAATATTGTAGTCAGAA 3211 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || | ||||| || | | | |||| ||| || || || || || Sbjct 3212 AGAGTACGACCATCTTCCAACTGTTTTCCAGCAAAAATTAAACGTTGCTGATCTGGTGGA 3271 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || |||||||| ||| | || | ||||| | ||| | ||| || | | || || Sbjct 3272 ATTCCCTCTTTGTC-CTGAATCTTGGCTTTAACATTTTCAATGGTATCAGAAGGTTCGAC 3330 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGC 138617 ||| | || | || ||||| || || ||||| ||||| |||||||| || Sbjct 3331 CTCAAGTGTGATGGTCTTACCCGTTAGGGTTTTAACAAATATCTGCATTGC 3381 >seq22680 Length=2395 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 138424 TCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483 |||||||| |||||||||||| | | || | |||||||| |||||||| | | Sbjct 811 TCCTTTTGGATGTTGTAGTCGTTAAGGGTCCTTCCATCCTCGAGCTGTTTACCTGCGAAT 870 Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT 138543 || | | |||||||| ||||| || ||||||||||| ||| ||| ||||| | | Sbjct 871 ATCAATCTTTGTTGGTCTGGAGGGATTCCTTCTTTGTCTTGGATCTTTGCTTTTACGTTT 930 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 || | ||||| || || ||||| | | | || || || || || ||||| ||| Sbjct 931 TCGATCGTGTCTGTGCTTTCGACCTCCAAGGCTATTGTCTTTCCTGTTAGTGTTTTGACA 990 Query 138604 AAAATCTGCAT 138614 || || ||||| Sbjct 991 AAGATTTGCAT 1001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495068516731200