Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq175891 152 4e-32 seq188148 100 2e-16 seq20636 95.1 9e-15 seq185055 89.7 4e-13 >seq175891 Length=10111 Score = 152 bits (168), Expect = 4e-32 Identities = 174/232 (75%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| || || | ||| || ||||| | || || |||||||| || |||||||| Sbjct 8546 TGCCACCACGTAAACGTAATACCAAATGCAATGTGGATTCTTTTTGAATATTGTAATCA- 8488 Query 15008 TGAGAATTCTCGC--GTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTT 15065 || ||| ||| |||||| |||||||||||||| | |||||||| ||||| || Sbjct 8487 -GACAATGTGCGCCCGTCTTCCAATTGTTTGCCAGCAAAAATCAAACGTTGTTGATCTGG 8429 Query 15066 TGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTC 15125 || |||||||||||||| |||||| ||||||| |||| ||||||||| | || Sbjct 8428 GGGGATTCCTTCCTTGTCTTGAATTTTAGCTTTTACATTTTCAATAGTATCGGAAGGCTC 8369 Query 15126 TACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || || |||||||| || |||| || || ||||| ||||||||| Sbjct 8368 AACCTCCAAAGTGATGGTTTTGCCAGTCAATGTCTTGACAAAGATTTGCATA 8317 Score = 152 bits (168), Expect = 4e-32 Identities = 164/215 (76%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 14964 TAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CG 15021 ||| ||||| ||||||||||| |||||||| |||||||||||| || ||| || | Sbjct 8758 TAATACTAAGTGAAGGGTAGATTCTTTTTGGATGTTGTAATCG--GACAATGTACGTCCA 8701 Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081 ||||| |||||||| |||||| | || ||||||||||| || ||||| ||||| ||| Sbjct 8700 TCTTCCAATTGTTTACCAGCGAAGATTAAACGCTGTTGATCTGGGGGAATACCTTCTTTG 8641 Query 15082 TCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141 || |||||| ||| || ||||||||||||| | ||| || |||| ||||| Sbjct 8640 TCTTGGATTTTGGCTTTAACGTTTTCTATAGTATCCGAAGGTTCAACCTCTAGTGTAATT 8581 Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| || || | ||||| || ||||||||||| Sbjct 8580 GTTTTTCCCGTTAAGGTTTTAACGAAAATTTGCAT 8546 Score = 125 bits (138), Expect = 5e-24 Identities = 158/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGT 15022 ||||| || ||||||||||| || ||||| ||||| ||||| || ||| || | | Sbjct 9213 AAAACCAAGTGAAGGGTAGATTCCTTTTGGATGTTATAATCA--GACAATGTACGTCCAT 9156 Query 15023 CTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGT 15082 |||| || || || || ||| | |||||||| |||||||| ||||| |||||||| | Sbjct 9155 CTTCCAACTGCTTACCGGCGAAAATCAAACGTTGTTGGTCTGGGGGAATACCTTCCTTAT 9096 Query 15083 CACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGG 15142 | ||||| |||||| | ||||||||||| ||||| || ||||| || | Sbjct 9095 CCTGGATTTTAGCCTTTACATTCTCTATAGTATCAGATGGCTCTACTTCCAAGGTGATAG 9036 Query 15143 TTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 |||| || |||| ||||| ||||| ||||||||| Sbjct 9035 TTTTTCCAGTCAAGGTTTTCACAAAGATTTGCATA 9001 Score = 123 bits (136), Expect = 2e-23 Identities = 167/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | | || ||| |||||||| ||||| |||||||| |||||||||||| Sbjct 8316 CCACCACGAAGACGTAGAACCAAATGAAGTGTAGATTCTTTTTGAATGTTGTAATCGGAC 8257 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | | | ||||||| |||||||| || || | |||||||| ||||| || ||| Sbjct 8256 AAAGTGCGTCCGTCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGTTGATCTGGGGGA 8197 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || ||||| || |||||| || || | || |||||||| | ||| || Sbjct 8196 ATACCCTCCTTATCTTGAATTTTAGCCTTGACGTTCTCAATAGTATCAGAAGGTTCGACC 8137 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGA 15182 |||||||| ||||| || || || | || || || || |||||||| || || Sbjct 8136 TCTAAGGTGATGGTCTTGCCAGTTAAGGTCTTCACGAAGATTTGCATTTTCGA 8084 Score = 122 bits (134), Expect = 6e-23 Identities = 166/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | | ||| ||||| ||||||||||| |||||||| |||||||| || | Sbjct 9000 CCACCACGGAGACGTAATACTAAGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCC--G 8943 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | ||| || | ||||| |||||||| ||||| | || ||||| ||||| || | Sbjct 8942 ACAATGTACGGCCATCTTCCAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGGG 8883 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| ||||| ||||| ||||| || || |||| || ||||| || | Sbjct 8882 GAATACCTTCTTTGTCTTGGATTTTAGCCTTGACGTTTTCAATGGTATCAGATGGCTCAA 8823 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | |||||||| || || || || || | ||| |||||||||||||||||| Sbjct 8822 CTTCTAAGGTGATAGTCTTGCCGGTTAAAGTCTTTACAAAAATTTGCATA 8773 Score = 114 bits (126), Expect = 9e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 ||||| || ||||||||||| || ||||| ||||| |||||| | | | | ||||| Sbjct 9669 AAAACCAAGTGAAGGGTAGACTCCTTTTGGATGTTATAATCGGACAAAGTGCGTCCGTCT 9610 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || |||||||| |||||| | |||||||| ||||| || ||||| ||||| || || Sbjct 9609 TCCAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCTTTATCT 9550 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 ||||| || ||| |||| || |||||| || || || || || || || Sbjct 9549 TGGATTTTTGCCTTGACATTTTCAATGGTATCGGATGGCTCAACTTCCAAAGTGATAGTC 9490 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || |||| ||||| || || ||||||||| Sbjct 9489 TTGCCGGTCAAGGTTTTGACGAAGATTTGCATA 9457 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 ||||| || ||||||||||| || ||||| ||||| |||||| | | | | | ||| Sbjct 9441 AAAACCAAGTGAAGGGTAGATTCCTTTTGGATGTTATAATCGGACAAAGTACGTCCATCT 9382 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || || || || || ||| | |||||||| || || || ||||| ||||| || || Sbjct 9381 TCCAACTGCTTACCGGCGAAAATCAAACGTTGCTGATCTGGAGGAATACCTTCTTTATCT 9322 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 |||||| || ||| |||| || ||||| ||||| || ||||||||||| Sbjct 9321 TGAATTTTAGCCTTGACATTTTCAATGGTATCAGATGGCTCTACTTCCAAGGTAATGGTC 9262 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || |||| || || || || ||||||||| Sbjct 9261 TTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 9229 >seq188148 Length=18106 Score = 100 bits (110), Expect = 2e-16 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTT 15025 || ||||| | || || || ||||| |||||||| ||| || || || | |||| Sbjct 3631 ACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCG--GACAAGGTACGACCATCTT 3688 Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085 | |||||||| || ||| | |||||||| ||||| || || || ||||| ||||| Sbjct 3689 CCAATTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGGGGGATACCTTCTTTGTCTT 3748 Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145 ||||| || ||| |||| || || ||| | || || || ||||||||||||| Sbjct 3749 GGATTTTAGCCTTGACATTTTCAATGGTGTCGGAAGGCTCGACTTCCAAGGTAATGGTTT 3808 Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 |||| || | |||||| || || || ||||| Sbjct 3809 TACCAGTTAAAGTTTTGACGAAGATCTGCAT 3839 >seq20636 Length=14080 Score = 95.1 bits (104), Expect = 9e-15 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 79308 AAACCTAAACAATTAGCCGAAGCGGGATTCTTTTACACCGGTTTTGGTGACAAAACAAAA 79367 |||||| |||||| |||||||| || |||||||| |||||| ||||| ||| Sbjct 5502 AAACCTGCACAATTGGCCGAAGCTGGTTTCTTTTATACCGGTACAGGTGATCGCGTCAAA 5443 Query 79368 TGTTTCTATTGTGGCGGTGGCGTTTGCAAATGGGAATTAAATGATGACCCATGGGAACAG 79427 |||||| ||| || ||||| | | ||||| |||||||||||| |||||||| Sbjct 5442 TGTTTCAGTTGCGGTGGTGGTCTAAAGGATTGGGATGAAAATGATGACCCCTGGGAACAA 5383 Query 79428 CACGCCATCTGGTTTGGAAATTGTACATATGTAAAAATAATAAAAGG 79474 ||||| || ||| | || || ||| ||||||||| || | || || Sbjct 5382 CACGCTATATGGATGGGTAAATGTCGTTATGTAAAATTAGTTAAGGG 5336 >seq185055 Length=12631 Score = 89.7 bits (98), Expect = 4e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || ||||| || ||||| || ||||| |||||||| || ||| | | | || ||| Sbjct 12444 ACCAAATGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAGAGTACGGCCATCCTCT 12503 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 ||||||||||||||| | |||||||| ||||| || ||||| ||||| || || Sbjct 12504 AATTGTTTGCCAGCGAAGATCAAACGTTGTTGATCTGGGGGAATGCCTTCTTTATCTTGG 12563 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || || ||| |||| || |||||| ||| || || || || || ||||| Sbjct 12564 ATCTTAGCCTTAACATTTTCAATGGTATCGGATGGTTCGACTTCCAAAGTGATAGTTTTG 12623 Query 15148 CCTGTCA 15154 || |||| Sbjct 12624 CCGGTCA 12630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356553699091100