Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq31717 100 3e-16 >seq31717 Length=19532 Score = 100 bits (110), Expect = 3e-16 Identities = 240/356 (67%), Gaps = 8/356 (2%) Strand=Plus/Plus Query 175746 AACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 175805 |||| || |||||||| |||| || || || | ||||| || | | || ||||| Sbjct 6776 AACCAGTACCAATACCATCGGCACCATTTACCAATACCATGGGTATAATGGGTATATACC 6835 Query 175806 AGTCTGGTTCAATCGCACGCCCATCATCGTCCAAATAGTTGAGCACGGGGTCATCCCTCG 175865 | | ||||||||| | ||||||||| | || | ||| | || ||||| | Sbjct 6836 ACTGAGGTTCAATCTTTTGACCATCATCGACTTCGTACTGGAGTAAAGGATCATCATGGG 6895 Query 175866 GATCAAAGATTTTACGAGCATCCTTGGTGAGTT--TTGTGAAGATGTACCTCGTTTGAGA 175923 ||| || || |||||| | || || | | ||||| || || | | || Sbjct 6896 GATGGAATATCAAACGAGC--CAAGGGAGACATAATGGTGAAAATATAACGAGCGCTAG- 6952 Query 175924 CGCA-TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGA 175982 |||| |||||||||||| | | ||| || || |||||||| | ||||| || | ||||| Sbjct 6953 CGCAATCTTTGCCACCCGTTAAACGAGTACCGAATTGACCTCTAGGCTCTAGCAAATTGA 7012 Query 175983 TATTGTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGT-ATCCGCGAGGGAGACT 176041 | || || || |||| ||| | | || || || ||||| || || | || |||||| Sbjct 7013 TGTTATTAGAACCCACATAATTTTGAGCTAAATTAACAATAGTCATTTG-TAGAGAGACT 7071 Query 176042 TCACCGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTT 176097 ||||| ||||||||||| ||| | || || ||| | | | ||| || || ||||| Sbjct 7072 TCACCATGATGGTAGGCAGACATTTCAGCAACAGAACCGGACAATTGAGCAACCTT 7127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612031255053600