Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq175891 120 7e-22 seq22680 114 3e-20 seq5262 114 3e-20 seq185055 98.7 2e-15 seq188148 96.9 8e-15 seq137448 95.1 3e-14 >seq175891 Length=10111 Score = 120 bits (132), Expect = 7e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| || || || |||||||||| ||| || || | |||||| | ||||||||||| ||| Sbjct 9433 GTGAAGGGTAGATTCCTTTTGGATGTTATAATCGGACAAAGTACGTCCATCTTCCAACTG 9374 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| |||||||| || | ||| ||||| || ||| ||| |||||| || ||||| || Sbjct 9373 CTTACCGGCGAAAATCAAACGTTGCTGATCTGGAGGAATACCTTCTTTATCTTGAATTTT 9314 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| || ||| | ||| || | || ||||| ||||| || || ||||| || || Sbjct 9313 AGCCTTGACATTTTCAATGGTATCAGATGGCTCTACTTCCAAGGTAATGGTCTTGCCGGT 9254 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 | || || || || ||||| Sbjct 9253 CAAGGTCTTGACGAAGATTTG 9233 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| || || || |||||||||| ||| || |||| ||| || Sbjct 9222 CGAAGACGCAAAACCAAGTGAAGGGTAGATTCCTTTTGGATGTTATAATCAGACAATGTA 9163 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||| |||||| |||||||| || | ||| || ||||| || ||| ||| Sbjct 9162 CGTCCATCTTCCAACTGCTTACCGGCGAAAATCAAACGTTGTTGGTCTGGGGGAATACCT 9103 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| || || ||| || || | || || | || ||||| ||||| Sbjct 9102 TCCTTATCCTGGATTTTAGCCTTTACATTCTCTATAGTATCAGATGGCTCTACTTCCAAG 9043 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || | ||||||||||| ||||| Sbjct 9042 GTGATAGTTTTTCCAGTCAAGGTTTTCACAAAGATTTG 9005 Score = 105 bits (116), Expect = 2e-17 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| || || ||||||||||||| ||| || || | |||||| | ||| ||||||| || Sbjct 9661 GTGAAGGGTAGACTCCTTTTGGATGTTATAATCGGACAAAGTGCGTCCGTCTTCCAATTG 9602 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 || || ||||| || | ||| || || || ||| ||| |||||| || || || || Sbjct 9601 TTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCTTTATCTTGGATTTT 9542 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 | ||| || ||| | ||| || | || || || ||||| ||||| ||||| || || Sbjct 9541 TGCCTTGACATTTTCAATGGTATCGGATGGCTCAACTTCCAAAGTGATAGTCTTGCCGGT 9482 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 | ||||| || || ||||| Sbjct 9481 CAAGGTTTTGACGAAGATTTG 9461 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| || || || || ||||||| ||||||||| | ||| || | |||||||||| || Sbjct 8977 GTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGACAATGTACGGCCATCTTCCAATTG 8918 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 || || || ||||| | ||| || || || || ||| |||||| || || || || Sbjct 8917 TTTACCAGCAAAGATTAAACGTTGTTGATCTGGGGGAATACCTTCTTTGTCTTGGATTTT 8858 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| ||| ||| | ||| || | || || || || || ||||| ||||| || || Sbjct 8857 AGCCTTGACGTTTTCAATGGTATCAGATGGCTCAACTTCTAAGGTGATAGTCTTGCCGGT 8798 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 | ||| || ||||||||||| Sbjct 8797 TAAAGTCTTTACAAAAATTTG 8777 Score = 95.1 bits (104), Expect = 3e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 || |||||||| |||||||||||||||||| | |||||| ||||||| ||| |||| || Sbjct 9359 ATTTTCGCCGGTAAGCAGTTGGAAGATGGACGTACTTTGTCCGATTATAACATCCAAAAG 9418 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 || ||||| |||||| | |||||| | || || Sbjct 9419 GAATCTACCCTTCACTTGGTTTTGCGTCTCCG 9450 Score = 91.5 bits (100), Expect = 3e-13 Identities = 143/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| || || || || ||||||| |||||| || | ||| || | ||||||||||| || Sbjct 8749 GTGAAGGGTAGATTCTTTTTGGATGTTGTAATCGGACAATGTACGTCCATCTTCCAATTG 8690 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 || || |||||||| | |||||| || || || ||| |||||| || || || || Sbjct 8689 TTTACCAGCGAAGATTAAACGCTGTTGATCTGGGGGAATACCTTCTTTGTCTTGGAT-TT 8631 Query 199546 TTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCG 199604 | || || ||| ||| | || || | | ||| || || | || || || || |||| Sbjct 8630 TGGCTTTAACGTTTTCTATAGTATCCGAAGGTTCAACCTCTAGTGTAATTGTTTTTCCCG 8571 Query 199605 TGAGAGTTTTCACAAAAATTTG 199626 | | ||||| || |||||||| Sbjct 8570 TTAAGGTTTTAACGAAAATTTG 8549 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 || |||||||| |||||||||||||||||| | || ||| | ||||| ||| |||| || Sbjct 9131 ATTTTCGCCGGTAAGCAGTTGGAAGATGGACGTACATTGTCTGATTATAACATCCAAAAG 9190 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 || ||||| |||||| | |||||| | ||||| Sbjct 9191 GAATCTACCCTTCACTTGGTTTTGCGTCTTCG 9222 >seq22680 Length=2395 Score = 114 bits (126), Expect = 3e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 |||||||||| ||||||||| | ||||||||||| || ||||| || || ||||| Sbjct 811 TCCTTTTGGATGTTGTAGTCGTTAAGGGTCCTTCCATCCTCGAGCTGTTTACCTGCGAAT 870 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || | | || ||||| ||| ||||||||| || || |||||| || ||| | Sbjct 871 ATCAATCTTTGTTGGTCTGGAGGGATTCCTTCTTTGTCTTGGATCTTTGCTTTTACGTTT 930 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 |||| |||||||| |||| || ||||| | || ||||| || || || ||||| ||| Sbjct 931 TCGATCGTGTCTGTGCTTTCGACCTCCAAGGCTATTGTCTTTCCTGTTAGTGTTTTGACA 990 Query 199619 AAAATTTG 199626 || ||||| Sbjct 991 AAGATTTG 998 >seq5262 Length=11329 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| | ||||| |||||||| | |||||||||| | ||| Sbjct 3158 CGAAGACGCAAAACCAAGTGCAATGTCGATTCCTTTTGAATATTGTAGTCAGAAAGAGTA 3217 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||| ||| ||||| || || || | ||| ||||| || || |||||| Sbjct 3218 CGACCATCTTCCAACTGTTTTCCAGCAAAAATTAAACGTTGCTGATCTGGTGGAATTCCC 3277 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| ||||||||||| || || ||| | ||| || | | ||| || || | Sbjct 3278 TCTTTGTCCTGAATCTTGGCTTTAACATTTTCAATGGTATCAGAAGGTTCGACCTCAAGT 3337 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||||||||| || ||||| ||||| || || Sbjct 3338 GTGATGGTCTTACCCGTTAGGGTTTTAACAAATATCTG 3375 >seq185055 Length=12631 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | |||||||| || |||||||||| ||||||||||| || ||| Sbjct 12432 CGAAGACGTAGCACCAAATGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAGAGTA 12491 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || | || || || |||||||| | ||| || || || || ||| ||| Sbjct 12492 CGGCCATCCTCTAATTGTTTGCCAGCGAAGATCAAACGTTGTTGATCTGGGGGAATGCCT 12551 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| ||| || ||| | ||| || | || ||| || ||||| Sbjct 12552 TCTTTATCTTGGATCTTAGCCTTAACATTTTCAATGGTATCGGATGGTTCGACTTCCAAA 12611 Query 199589 GTGATCGTCTTACCCGT 199605 ||||| || || || || Sbjct 12612 GTGATAGTTTTGCCGGT 12628 >seq188148 Length=18106 Score = 96.9 bits (106), Expect = 8e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | || | ||| || |||||||||| ||||||||| | ||| || Sbjct 3619 CGAAGGCGGAGTACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTA 3678 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||| || || ||||||||||| | ||| || || || || || ||| Sbjct 3679 CGACCATCTTCCAATTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGGGGGATACCT 3738 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || || || ||| || ||| | |||||| | | || || ||||| Sbjct 3739 TCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTGTCGGAAGGCTCGACTTCCAAG 3798 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || | |||||| || || || || Sbjct 3799 GTAATGGTTTTACCAGTTAAAGTTTTGACGAAGATCTG 3836 >seq137448 Length=735 Score = 95.1 bits (104), Expect = 3e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| ||||| || | ||| |||||| || | || |||||| || |||||| Sbjct 38 AGTCTCAACACAAGATGTAAAGTACTCTCCTTCTGTATATTATAGTCATTTAATGTCCTT 97 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| || |||||||| || || || || | | |||||||| ||| || |||||| Sbjct 98 CCATCCTCAAGCTGCTTCCCTGCAAATATCAATCTTTGCTGGTCAGGAGGTATCCCTTCT 157 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||| || || ||| || || | || || ||| || ||||| || Sbjct 158 TTGTCCTGTATTTTCGCCTTTACATTCTCAATTGTATCACCCCCTTCAACTTCCAATGTA 217 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| |||||||| ||||| ||||| ||||| Sbjct 218 ATTGTCTTTCCCGTGAGTGTTTTGACAAAGATTTG 252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176014504594820