Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq173136 132 6e-26 seq172082 116 5e-21 seq31717 102 1e-16 >seq173136 Length=30018 Score = 132 bits (146), Expect = 6e-26 Identities = 578/906 (64%), Gaps = 15/906 (2%) Strand=Plus/Plus Query 112089 GATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGC 112148 ||||| || | ||| | |||||||| || | || ||||| ||||| || || | || Sbjct 2602 GATCTTTTTTATGCTTTATGGATTCCCGACTTGTTTATGAAAAGAGTAGAAGAAAACGGT 2661 Query 112149 AATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAG 112208 | ||||| | | ||||| | || ||||| || |||| | |||||| ||| Sbjct 2662 GACTGGTCCTTAATGTGTCCCCATAAATGTCCCGGCCTGCAGGATGTCTGGGGTGAAGAG 2721 Query 112209 TTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCT 112268 |||||| | || || ||||| || ||||| | || | | || || || Sbjct 2722 TTTGAACAGTTGTATACCAAGTATGAAAAAGAAGGCAAAGCTAATCGCACTGTTAAGGCA 2781 Query 112269 GCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTT 112328 | | | ||| || || | || | ||| || ||||||||||| || ||| | Sbjct 2782 CAGGCTCTATGGTTTGCCATCATTGAGGCCCAAGTAGAAACTGGTACACCCTACATGTTA 2841 Query 112329 TACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCC 112388 ||||| || |||||||| | |||||||| || | ||| | || || || | | Sbjct 2842 TACAAGGATGCCTGTAATCGCAAGAGTAACCAGCAAAATATAGGCACTATTAAATGCAGC 2901 Query 112389 AACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTC 112448 ||||| ||||||||||| | |||| | | | | ||||| | || || ||||| | Sbjct 2902 AACCTGTGTACAGAAATTGTAGAATATTCTGCCCCCGATGAAATAGCCGTTTGTAATTTG 2961 Query 112449 GCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAA 112508 || || || || || | || ||| || ||| || ||||| || | | | ||| Sbjct 2962 GCCTCCATTGCGCTTAATATGTTTGTTACACCTGAG---AAAACATTCGACTTTAAGAAA 3018 Query 112509 CTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTT 112568 | | | ||||| ||| | | || | || |||| | | |||| || | ||||| | Sbjct 3019 TTGAAAAATGTTACTAAAGTTATTACCAGGAATTTAAATAAAATTATAGACATAAATTAT 3078 Query 112569 TA-CCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGT 112627 || |||| ||| || ||||||||| || | || || || |||||| | ||||| Sbjct 3079 TATCCCCTGCCAGA-GGCAAAGAAATCTAATCTGCGTCATCGCCCCATTGGTATAGGTGT 3137 Query 112628 CCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAA 112687 ||| ||| | || ||| || ||| | ||| | | | ||| || | || Sbjct 3138 CCAGGGTTTTGCTGATACTTTGATTTTAATGCGCTTCCCCTATGAGAGTGAACAGGCCTT 3197 Query 112688 GGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGA 112747 | | || | |||||||| || || ||| | | || | ||||| |||| || Sbjct 3198 TTTATTGAACCAACAAATATTTGAAACCATTTATTATGGTGCCTTAGAGGCCAGTTGTGA 3257 Query 112748 GTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGT 112807 |||||||| ||||| |||||||||||| | || | ||||| | |||| | Sbjct 3258 ATTGGCAGAAAAATATGGTACATATGAAACCTATCCCGGCTGTCCAGTTAGCAAAGGAAT 3317 Query 112808 GCTTCAATTTGATATGTGGGAAGGTGAGACCAA---GCTTCACTACGACTGGGACGCTCT 112864 || |||| |||||||| |||| | ||| | ||| | || ||| || | Sbjct 3318 ACTACAATATGATATGT-GGAATAAAACACCTACTGACTT--GTGGGATTGGTCGGCATT 3374 Query 112865 CAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCA 112922 || ||| |||||| | | ||| | |||||| ||||| | || || || ||||| Sbjct 3375 AAAAGAAAAAATCAAGCAACATGGTGTACGTAAC--TCTTTGCTTATTGCTCCCATGCCT 3432 Query 112923 ACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAAC 112982 ||||| || ||||| || || ||||| |||||||||| |||||||| || || | ||| Sbjct 3433 ACAGCATCTACCGCTCAGATTTTGGGCAATAATGAATCATTTGAACCTTATACTTCTAAC 3492 Query 112983 ATCTAT 112988 || ||| Sbjct 3493 ATATAT 3498 >seq172082 Length=56793 Score = 116 bits (128), Expect = 5e-21 Identities = 456/703 (65%), Gaps = 18/703 (3%) Strand=Plus/Minus Query 101816 TTGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTCTAAATGA 101875 |||||| | ||| || || |||||||| |||||| || ||| | | || | || Sbjct 15364 TTGGACCGTTGAGGAAGTTGATCTCTCCAAGGATAATTCTGACTGGGAAAGACTTACCGA 15305 Query 101876 AAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATTGT 101935 |||||| | || || | || | |||||||||||||| | |||||||| || || Sbjct 15304 CAATGAACGTCATTTTATTTCACACGTTCTGGCATTCTTTGCCGCTTCCGATGGTATAGT 15245 Query 101936 TTTTGAGAATATCAATAACAACTTTGCTG--ATGAGGTGCAATCCTCTGAAGCGAGATCT 101993 | ||| ||| | | | || || || | ||||||||| | || || | | | Sbjct 15244 TAATGAAAATCTTGTTGA--ACGTTTCTCCCAAGAGGTGCAAGTAACAGAGGCTCGTTGT 15187 Query 101994 TTCTATGCGTATCAA--TGTCATAATGAAATGGTGCATGGGGAGACATACAGTAAACTCA 102051 ||||||| | ||| || ||| |||| || || || | || |||| | | Sbjct 15186 TTCTATGGTTTCCAAATTGCCATG--GAAAATGTACACTCCGAAATGTATAGTATTTTAA 15129 Query 102052 TAGACAAGTATATTAAGGATGGTGCTGAGA-AGAAGCAGCTCTTTGAAGCCATCCAAACA 102110 | |||| || ||||||||| ||| | | |||| | || ||| | || || |||| Sbjct 15128 TTGACACTTACATTAAGGATCGTGATCAACGAGAAT-ATCTATTTAATGCTATTGAAACT 15070 Query 102111 GTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGG-TTTGATACAAAGTCGCG 102169 | ||| | || | || || |||||||| ||| ||| ||| || ||| ||| Sbjct 15069 ATGCCAGCTGTTAAGCGTAAGGCCGATTGGGCCATGTCTTGGATTTCATCTAAA-TCGGC 15011 Query 102170 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 102229 | |||| |||||| | | |||||||| ||| |||||||| |||||| |||| Sbjct 15010 TAATTTTGGTGAGCGTATTATTGCATTTGCTGCTGTCGAGGGTATTTTCTTCAGTGGTAG 14951 Query 102230 CTT--CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 102287 || || || ||||| ||||||||||| || ||||| ||||| || || |||||| Sbjct 14950 TTTTGCTTCGATATTT--TGGCTCAAGAAACGTGGTCTTATGCCTGGCCTTACATTCTCC 14893 Query 102288 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTCAAA 102347 || || | ||||| ||||| ||||| | || || ||||| || | | || ||| Sbjct 14892 AATGAATTGATCTCACGTGATGAGGGTTTACATTGTGATTTTGCTGTTTTAATGTTTAAA 14833 Query 102348 TTATTGCGTATTA-AACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCGTTGA 102406 ||| ||| | || | | || | ||| | || || ||| || || | Sbjct 14832 -CATTTGGTACAACGTCCTAGTAGGGATAGAATTATTGAAATCATTTCGGAGGCGGTAAA 14774 Query 102407 GATTGAGAAGGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGA 102466 ||||| ||| |||| || ||||| || || | | || |||||||||| | | Sbjct 14773 AATTGAACAGGAATTCTTAACAGATGCTCTACCCGTAAATTTGATTGGTATGAATTGTAA 14714 Query 102467 AAAGATGTCCGAATATATTGAGTATGTATCTGATAGATTGTTG 102509 | |||||| ||||||||||||| ||| | ||| | |||||| Sbjct 14713 ATTGATGTCGGAATATATTGAGTTTGTGGCCGATCGTTTGTTG 14671 >seq31717 Length=19532 Score = 102 bits (112), Expect = 1e-16 Identities = 170/246 (69%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 176020 ATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATT 176079 ||| || |||||| | | ||| ||||| || ||||| | ||||| || | |||||| || Sbjct 6957 ATCTTTGCCACCCGTTAAACGAGTACCGAATTGACCTCTAGGCTCTAGCAAATTGATGTT 7016 Query 176080 GTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCACC 176139 || ||||||| || | | || || || ||||| || |||||||||||||| Sbjct 7017 ATTAGAACCCACATAATTTTGAGCTAAATTAACAATAGTCATTTGTAGAGAGACTTCACC 7076 Query 176140 GTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCATC 176199 || ||||| ||| | | || || ||| | | | ||| || || || || | ||| Sbjct 7077 ATGATGGTAGGCAGACATTTCAGCAACAGAACCGGACAATTGAGCAACCTTGACTTCACG 7136 Query 176200 CTTGAGATTCTTGTGGAAACATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCATC 176259 ||| ||| | |||||| | | |||||||||| ||||| |||||| | |||||| Sbjct 7137 TTTGTCATTACGTTTGAAACAGGTGAACATAACCTTACGTTGACCAGGCTTAAAACCATC 7196 Query 176260 CGCCAT 176265 | |||| Sbjct 7197 CACCAT 7202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619249048971200