Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_015251.1 Length=235229 Score E Sequences producing significant alignments: (Bits) Value seq171562 87.8 3e-12 >seq171562 Length=979 Score = 87.8 bits (96), Expect = 3e-12 Identities = 92/119 (77%), Gaps = 4/119 (3%) Strand=Plus/Minus Query 113784 GTCTGGGGTTCAAGTCCTCATGGGCCTGCCAAG---TTTGGGGGATTAGCTCAGTTGGAA 113840 ||| | ||||||||||| | |||| |||| || ||||||||||||||||||| | Sbjct 977 GTCGGTGGTTCAAGTCCACCCAGGCCCACCAATCCTTTAGGGGGATTAGCTCAGTTGGTA 918 Query 113841 TGAGCGACTGGTTTGCAACCAGTAGGTCATCGGTTCGACCCCGATATCCTCCACCAATT 113899 ||||| ||| ||||| ||| ||| | |||||||||| ||| ||||||||||| || Sbjct 917 -GAGCGCCTGCCTTGCACGCAGGAGGCCGTCGGTTCGACTCCGTCATCCTCCACCATTT 860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 750794221002400