Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq175891 165 2e-35 seq22680 152 1e-31 seq188148 149 1e-30 seq137448 129 1e-24 seq5262 125 2e-23 seq185055 107 4e-18 >seq175891 Length=10111 Score = 165 bits (182), Expect = 2e-35 Identities = 168/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||| | |||||| | |||||| || || || ||||| || || ||||||| | ||| | Sbjct 9448 GAGACGCAAAACCAAGTGAAGGGTAGATTCCTTTTGGATGTTATAATCGGACAAAGTACG 9389 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 |||||||| | ||||||||| ||||| || | ||||| || ||||||||||| ||||| Sbjct 9388 TCCATCTTCCAACTGCTTACCGGCGAAAATCAAACGTTGCTGATCTGGAGGAATACCTTC 9329 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||| ||||||||||| |||||| || |||||||| || || || ||||| | ||| Sbjct 9328 TTTATCTTGAATTTTAGCCTTGACATTTTCAATGGTATCAGATGGCTCTACTTCCAAGGT 9269 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || ||||| || || ||||| | |||||| Sbjct 9268 AATGGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 9230 Score = 156 bits (172), Expect = 9e-33 Identities = 166/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||| | |||||| | |||||| || ||||| ||||| || || ||||||| | ||| | Sbjct 9676 GAGACGCAAAACCAAGTGAAGGGTAGACTCCTTTTGGATGTTATAATCGGACAAAGTGCG 9617 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 || ||||| | || ||||| ||||| || | |||||||| ||||||||||| ||||| Sbjct 9616 TCCGTCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACCTTC 9557 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||| ||||| |||||| |||||| || |||||||| || || || ||||| | || Sbjct 9556 TTTATCTTGGATTTTTGCCTTGACATTTTCAATGGTATCGGATGGCTCAACTTCCAAAGT 9497 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || ||||| ||||| ||||| | |||||| Sbjct 9496 GATAGTCTTGCCGGTCAAGGTTTTGACGAAGATTTGCAT 9458 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988 || || | |||||| || || |||||||| || |||||||||| | || | |||||| Sbjct 8757 AATACTAAGTGAAGGGTAGATTCTTTTTGGATGTTGTAATCGGACAATGTACGTCCATCT 8698 Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 || | || ||||| |||||||| | || ||||| ||||| ||||| |||||||||||| Sbjct 8697 TCCAATTGTTTACCAGCGAAGATTAAACGCTGTTGATCTGGGGGAATACCTTCTTTGTCT 8638 Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108 || ||||| || ||||| || || || |||||| ||| || || || |||| || Sbjct 8637 TGGATTTTGGCTTTAACGTTTTCTATAGTATCCGAAGGTTCAACCTCTAGTGTAATTGTT 8578 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| || || ||||| ||||| | |||||| Sbjct 8577 TTTCCCGTTAAGGTTTTAACGAAAATTTGCAT 8546 Score = 145 bits (160), Expect = 2e-29 Identities = 155/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| || || ||||||||||| |||||||||| | ||| | || ||||| | || Sbjct 8292 TGAAGTGTAGATTCTTTTTGAATGTTGTAATCGGACAAAGTGCGTCCGTCTTCCAATTGT 8233 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| || || || | |||||||| ||||| ||||| || || || ||||||||||| Sbjct 8232 TTACCGGCAAAAATCAAACGTTGTTGATCTGGGGGAATACCCTCCTTATCTTGAATTTTA 8173 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||||||||||||| || || ||| ||| || || | ||| | ||||| || || Sbjct 8172 GCCTTGACGTTCTCAATAGTATCAGAAGGTTCGACCTCTAAGGTGATGGTCTTGCCAGTT 8113 Query 195118 AAAGTTTTTACGAACACTTGCATTT 195142 || || || ||||| | |||||||| Sbjct 8112 AAGGTCTTCACGAAGATTTGCATTT 8088 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988 || || | |||||| || || |||||||| || ||||| || | | || | |||||| Sbjct 8985 AATACTAAGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGACAATGTACGGCCATCT 8926 Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 || | || ||||| || ||||| | |||||||| ||||| ||||| |||||||||||| Sbjct 8925 TCCAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGGGGAATACCTTCTTTGTCT 8866 Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108 || ||||| ||||||||| |||||||| || || || ||||| | ||| | ||| Sbjct 8865 TGGATTTTAGCCTTGACGTTTTCAATGGTATCAGATGGCTCAACTTCTAAGGTGATAGTC 8806 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| ||||| || | |||||| Sbjct 8805 TTGCCGGTTAAAGTCTTTACAAAAATTTGCAT 8774 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 |||||| | |||||| || || || ||||| || || ||||| | | || | ||||| Sbjct 9214 CAAAACCAAGTGAAGGGTAGATTCCTTTTGGATGTTATAATCAGACAATGTACGTCCATC 9155 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| | ||||||||| ||||| || | |||||||||||||| ||||| ||||| || || Sbjct 9154 TTCCAACTGCTTACCGGCGAAAATCAAACGTTGTTGGTCTGGGGGAATACCTTCCTTATC 9095 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 || ||||| ||| || ||||| || || || || || ||||| | ||| | || Sbjct 9094 CTGGATTTTAGCCTTTACATTCTCTATAGTATCAGATGGCTCTACTTCCAAGGTGATAGT 9035 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| ||||| || || | |||||| Sbjct 9034 TTTTCCAGTCAAGGTTTTCACAAAGATTTGCAT 9002 Score = 107 bits (118), Expect = 4e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 ||||| |||||||||||||||||||| | | || | ||| ||||| | || || || Sbjct 8514 GTGGATTCTTTTTGAATATTGTAATCAGACAATGTGCGCCCGTCTTCCAATTGTTTGCCA 8455 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 || || || | |||||||| ||||| || || ||||| |||||||||||||| || Sbjct 8454 GCAAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTGTCTTGAATTTTAGCTTTT 8395 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || || ||||| || || ||| || || || | || | || || || ||||| || Sbjct 8394 ACATTTTCAATAGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTGCCAGTCAATGTC 8335 Query 195124 TTTACGAACACTTGCAT 195140 || || || | |||||| Sbjct 8334 TTGACAAAGATTTGCAT 8318 Score = 107 bits (118), Expect = 4e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 195019 TGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTG 195078 ||||| ||||||||||| |||||||||||||| |||||| |||||| || ||||||||| Sbjct 10111 TGTTGATCTGGAGGAATACCTTCTTTGTCTTGGATTTTTGCCTTGACATTTTCAATGGTG 10052 Query 195079 TCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGC 195138 || || || ||||| | ||| | || || |||||||| || || ||||| | |||| Sbjct 10051 TCGGATGGCTCAACTTCCAAGGTGATGGTTTTACCTGTCAAGGTCTTGACGAAGATTTGC 9992 Query 195139 AT 195140 || Sbjct 9991 AT 9990 >seq22680 Length=2395 Score = 152 bits (168), Expect = 1e-31 Identities = 168/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| | || || || | ||| || ||||| || ||||| ||| ||| || Sbjct 780 TCTCAGTCTTAGTACCAGATGTAAGGTGCTTTCCTTTTGGATGTTGTAGTCGTTAAGGGT 839 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || ||||| |||||||| ||||||||||| || | || ||||||||||||||| || || Sbjct 840 CCTTCCATCCTCGAGCTGTTTACCTGCGAATATCAATCTTTGTTGGTCTGGAGGGATTCC 899 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||||||||| || ||| || ||||| || || ||||| | ||||| || || | Sbjct 900 TTCTTTGTCTTGGATCTTTGCTTTTACGTTTTCGATCGTGTCTGTGCTTTCGACCTCCAA 959 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || | ||||||||||| | ||||| || || | |||||||| Sbjct 960 GGCTATTGTCTTTCCTGTTAGTGTTTTGACAAAGATTTGCATTT 1003 >seq188148 Length=18106 Score = 149 bits (164), Expect = 1e-30 Identities = 154/199 (77%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTGCTTAC 195001 |||||| || ||||| || ||||| |||| |||| || | |||||||| | || |||| Sbjct 3642 AGTGGATTCCTTTTGGATGTTGTAGTCGGACAAG-GTACGACCATCTTCCAATTGTTTAC 3700 Query 195002 CTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCT 195061 | |||||||| | |||||||| ||||| || || |||||||||||||| ||||| || Sbjct 3701 CGGCGAAGATCAAACGTTGTTGATCTGGGGGGATACCTTCTTTGTCTTGGATTTTAGCCT 3760 Query 195062 TGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAG 195121 |||| || ||||||||||| ||| || ||||| | ||||| || || || || |||| Sbjct 3761 TGACATTTTCAATGGTGTCGGAAGGCTCGACTTCCAAGGTAATGGTTTTACCAGTTAAAG 3820 Query 195122 TTTTTACGAACACTTGCAT 195140 |||| ||||| | ||||| Sbjct 3821 TTTTGACGAAGATCTGCAT 3839 >seq137448 Length=735 Score = 129 bits (142), Expect = 1e-24 Identities = 163/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| |||||||| ||||| || | ||| ||| || || ||||| || || | || Sbjct 34 TCTCAGTCTCAACACAAGATGTAAAGTACTCTCCTTCTGTATATTATAGTCATTTAATGT 93 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || ||||| || |||||||| ||||| || || | || ||| ||||| ||||| || || Sbjct 94 CCTTCCATCCTCAAGCTGCTTCCCTGCAAATATCAATCTTTGCTGGTCAGGAGGTATCCC 153 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||| || ||||| ||| || |||||||| || || | ||| ||||| | Sbjct 154 TTCTTTGTCCTGTATTTTCGCCTTTACATTCTCAATTGTATCACCCCCTTCAACTTCCAA 213 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 |||| |||||||| || | ||||| || || | |||||||| Sbjct 214 TGTAATTGTCTTTCCCGTGAGTGTTTTGACAAAGATTTGCATTT 257 >seq5262 Length=11329 Score = 125 bits (138), Expect = 2e-23 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 |||||| | ||| | || || || |||||||||||||| || | |||||| | ||||| Sbjct 3166 CAAAACCAAGTGCAATGTCGATTCCTTTTGAATATTGTAGTCAGAAAGAGTACGACCATC 3225 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| | ||| || || || || || | ||||| || ||||| ||||| || |||||||| Sbjct 3226 TTCCAACTGTTTTCCAGCAAAAATTAAACGTTGCTGATCTGGTGGAATTCCCTCTTTGTC 3285 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||||| || || || || |||||||| || ||| ||| || ||||| || | || Sbjct 3286 CTGAATCTTGGCTTTAACATTTTCAATGGTATCAGAAGGTTCGACCTCAAGTGTGATGGT 3345 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||| || || | ||||| || || | |||||| Sbjct 3346 CTTACCCGTTAGGGTTTTAACAAATATCTGCATT 3379 >seq185055 Length=12631 Score = 107 bits (118), Expect = 4e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || ||||| || || ||||| || ||||| || | ||||| | ||||| || | || Sbjct 12450 TGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAGAGTACGGCCATCCTCTAATTGT 12509 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || |||||||| | |||||||| ||||| |||||||||||||| ||||| || || Sbjct 12510 TTGCCAGCGAAGATCAAACGTTGTTGATCTGGGGGAATGCCTTCTTTATCTTGGATCTTA 12569 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| || || |||||||| || || ||| ||||| | || | || || || ||| Sbjct 12570 GCCTTAACATTTTCAATGGTATCGGATGGTTCGACTTCCAAAGTGATAGTTTTGCCGGTC 12629 Query 195118 AA 195119 || Sbjct 12630 AA 12631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1106745736256820