Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq173136 603 1e-167 seq172082 318 7e-82 seq123671 201 1e-46 seq133038 159 4e-34 seq98949 141 1e-28 seq140204 87.8 2e-12 >seq173136 Length=30018 Score = 603 bits (668), Expect = 1e-167 Identities = 1494/2271 (66%), Gaps = 65/2271 (3%) Strand=Plus/Minus Query 46977 TCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACCAGTC 47036 || |||||||| | || | ||| |||| |||||||| |||||| ||||| || ||| Sbjct 3881 TCTACAGTAAATTGTATAGCATTGGCGGCTGGTTTTGTTCTTAAATAGTACATGCCGGTC 3822 Query 47037 TTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCT 47096 ||||| || |||| ||||||||| ||| ||||||||| ||| ||||||| Sbjct 3821 TTTAAGCCAGCCTTCCAAGAATAGAAATGTATAGAGGTTAATTTACCGTAATTAGGTTCA 3762 Query 47097 GAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATA 47156 | | || || |||| |||||||| ||||| || || || || | ||| || ||||| Sbjct 3761 GCTACGTGTATGTTAAAGGATTGACTTTGATCTATGAAAGCGCCACGATCGGCGGCCATT 3702 Query 47157 TCTAAAATAACCCTTTGTGGTA-TCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTC 47215 | ||| | ||| || | | ||||| ||||| ||||||| | ||| | || Sbjct 3701 T-TAATTGTGCTCTTGACGGAAATTTCCCAAACTGTCTTATAAAGGTCACGAATATTTT- 3644 Query 47216 TGGGAGATTAGTATTT----TGAATAGATCCTCCgttttctataattttgttttttaatt 47271 ||||| || | | | || |||||||| | || ||||||||| ||||| | | Sbjct 3643 TGGGAATTTCTTCTATGGCTTGTATAGATCCGCGATTGGATATAATTTTATTTTTCATAT 3584 Query 47272 catttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAATTTGAA 47331 || ||| | | |||| ||||| ||| || | |||| ||||||||| | | Sbjct 3583 TATCATCCCACAAATCAAGTTCTGTTAAATCTTTCAATAAATGATGATTAACAACATTGA 3524 Query 47332 ATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATTCAT 47391 ||||||| ||||| || | ||| ||||||| ||| ||||| ||||| | ||||||| Sbjct 3523 ATTCTCCTGATAGCACACGTCGGGTATATATGTTAGAAGTATAAGGTTCAAATGATTCAT 3464 Query 47392 TATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTA---- 47447 |||| || ||||| ||||| || |||||||||||||||| |||| ||||| | Sbjct 3463 TATTGCCCAAAATCTGAGCGGTAGATGCTGTAGGCATGGGAGCAA----TAAGCAAAGAG 3408 Query 47448 TTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGAT 47507 || | ||| |||| || | || | ||||||||| | || | Sbjct 3407 TTACGTACACCATGTTGCTTGATTTTTTCTTTTAATGCCGACCAATCCCACAAGTCAGTA 3348 Query 47508 GGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATAT 47567 || |||||| | ||||||||| || |||||||| || | ||| | || ||| Sbjct 3347 GGTGTTTTATTCCACATATCATATTGTAGTATTCCTTTGCTAACTGGACAGCCGGGATAG 3288 Query 47568 GTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATAT 47627 |||| ||| | ||| ||| || || | ||||||||| || || || |||| |||||| Sbjct 3287 GTTTCATATGTACCATATTTTTCTGCCAATTCACAACTGGCCTCTAAGGCACCATAATAA 3228 Query 47628 ATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGATTC--AAAAGGATANN 47685 || ||||||||||||| | ||| | || ||| | | || | | || | Sbjct 3227 ATGGTTTCAAATATTTGTTGGTTCAATAAAAAGGC--CTGTTCACTCTCATAGGGGAAGC 3170 Query 47686 NNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTT 47745 || ||||| || || || || ||||| |||||||| || | |||| Sbjct 3169 GCATTAAAATCAAAGTATCAGCAAAACCCTGGACACCTATACCAATGGGGCGATGACGCA 3110 Query 47746 TATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAGAN 47805 |||||| || || ||||| | ||||| | ||||| |||||||||||||||| | Sbjct 3109 GATTAGATTTCTTTGCCTCTGGCAGGGGATAATAATTTATGTCTATAATTTTATTTAAAT 3050 Query 47806 NNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACTTGTTATT---TA 47862 || | | | ||||| ||||| || || | || | | Sbjct 3049 TCCTGGTAATAACTTTAGTAACATTTTTCAATTTCTTAAAGTCGAATGTTTTCTCAGGTG 2990 Query 47863 TAACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAG 47922 |||||||| ||||||| || || || || | |||||| || |||| |||| || || Sbjct 2989 TAACAAACATATTAAGCGCAATGGAGGCCAAATTACAAACGGCTATTTCATCGGGGGCAG 2930 Query 47923 TATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGAT 47982 ||||| || ||||| | ||| || || | ||||| ||||| || | |||||| || | Sbjct 2929 AATATTCTACAATTTCTGTACACAGGTTGCTGCATTTAATAGTGCCTATATTTTGCTGGT 2870 Query 47983 TATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAG 48042 || | ||||| || |||||||| | ||| | ||||| |||||||||| || | Sbjct 2869 TACTCTTGCGATTACAGGCATCCTTGTATAACATGTAGGGTGTACCAGTTTCTACTTGGG 2810 Query 48043 ATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATAACAGCTC---TAGCTTTATTAT 48099 |||||||| | ||| | || | ||||| ||||| | ||||||| | Sbjct 2809 CCTCAATGATGGCAAACCATAGAGCCTGTGCCTT---AACAGTGCGATTAGCTTTGCCTT 2753 Query 48100 CATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAG 48159 | | ||| || || ||||| |||| ||||| || || || | |||| | | || | Sbjct 2752 CTTTTTCATACTTGGTATACAACTGTTCAAACTCTTCACCCCAGACATCCTGCAGGCCGG 2693 Query 48160 GACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATA 48219 |||||| || |||||||| || ||||| || | | | || |||||| ||||||| | Sbjct 2692 GACATTTATGGGGACACATTAAGGACCAGTCACCGTTTTCTTCTACTCTTTTCATAAACA 2633 Query 48220 TATCTGGTATCCAAAGAGCTATAAATAA-ATCCCTAGTTCTTAGTTCTTCATTGCCACTA 48278 || || ||||| | ||| ||||| || ||| |||| ||| | ||||| || ||| || Sbjct 2632 AGTCGGGAATCCATAAAGC-ATAAAAAAGATCTCTAGCTCTGTGCTCTTCTTTACCAGTA 2574 Query 48279 TTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCC 48338 || | || | || | ||| || | ||||| | |||||| ||||| ||||| || || Sbjct 2573 TTTTTCTTTAAATCTAAAAATTCAAAAATATCTGAATGCCAAGGTTCCAAATAAATAGCA 2514 Query 48339 ATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACT 48398 | | || || ||||| ||| ||||| |||| ||| | ||| ||| ||| | || Sbjct 2513 AAGGCTCCAGGACGTTTGCCACCACCTTGGTCTACATAACGGGCCACATTATTAAACACC 2454 Query 48399 CTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTA 48458 || | ||| || || | |||||| || | ||||| ||||| ||| || | || | Sbjct 2453 CTAAGCATCGGTACCAGACCATTAGAGGTGCCATTAGTTCCATCGATAGAAGTACCCTTG 2394 Query 48459 GCTCTTATAT--TACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCAC 48516 || || ||| | ||| | ||||||||||||| ||| || || || | ||||| Sbjct 2393 GCCCTAATACAGTGGACATTTA--TACCTATACCACCCGCCGACTTGGAAATCATAGCAC 2336 Query 48517 ACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAAC 48576 | ||| | | | |||| || || ||| |||| | | |||| | || || || | Sbjct 2335 ATTGTTCCACCGACTTGAAAATACCCTCAATAGAATCAGCCACCATAGTCAACAGGAAGC 2276 Query 48577 AACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAA 48636 || |||| ||| || | ||| | | |||||| || || || ||||| ||| Sbjct 2275 AAGAGGACAATTGTGGCCTATTAGTGGCAGCCGCAAATAACGTGGGCGAGGCATGGGTAA 2216 Query 48637 ACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTA 48696 | | ||| || ||||| ||||| ||||| || | ||||| |||||| | ||||| Sbjct 2215 AATAACGCTCAGACAACAAATTATACGTTTCTATGGCCGAATCAATATCCTCTCCATGTA 2156 Query 48697 TACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTT 48756 ||||||||| ||| | ||||||||||| || ||||| || ||||| || ||| |||| Sbjct 2155 TACCTATAGCTACCCTCATTAACATATGCTGTGGTCTCTCCACAATCTTACCATTCATTT 2096 Query 48757 TCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTAT 48816 ||| | ||| || | |||| |||||||||||||||||| || || ||| || || Sbjct 2095 TCAGTAAATACGACCTCTCCAGTGTTTTAAAACCAAAATAATTATAACCAAAATCACGAT 2036 Query 48817 CATTAATAATTGATGAATTTATTCTTTCCTTATGTTTATATACTACAT--CCATTACATT 48874 ||| ||| || || ||||| | | ||| || || | || |||| || | | Sbjct 2035 CATAAATTATGGAAGAATTCAAACGTTCAGCATTCTTTTGCACCACATTGTAATGAAA-- 1978 Query 48875 TTTTGATATAAT---TGA------------TTCCTTGTAA------------AGATCTTC 48907 || || || || ||| |||||| | | | ||| Sbjct 1977 TTCGGAAATCATGGGTGAAGGTTTACCAGTTTCCTTATTAACATAATGATGCAAATCACT 1918 Query 48908 TACAACATCACTAAATAttttttttGTTTCTTTATGAAGATTAGATATAGATATTCTAGC 48967 || ||| ||| ||| | ||||| ||||| || || ||||| |||| || || | ||| Sbjct 1917 TATAACCTCAGAAAACACCTTTTTAGTTTCCTTGTGTAGATTGGATACAGCAATCCGAGC 1858 Query 48968 AGCTAATATAGCATAATCTGGATGAATTGTTGTACATGTACTAGATATTTCTGCTGCTAA 49027 || ||||| |||||||| |||| ||||||| ||||| | | || || || || Sbjct 1857 CGCCAATATGGCATAATCGCCATGATTTGTTGTTAATGTAGCCGCCGTCTCAGCAGCCAA 1798 Query 49028 TATATCTAATTCTTTAGTAGTTACACCTGTATATATTCCTTGAATAACTTTCATTGCTAT 49087 |||||||||||| ||||| ||||| |||| || | ||| ||||| | || ||| Sbjct 1797 ATTATCTAATTCTTGGGTAGTAACACCACAGTATAAACCATTAATCACTTTAAGTGTTAT 1738 Query 49088 ATTTACTGGATCTATATGATCCATATCCAGTCCATAACATAAtttttttATTCTAGATGT 49147 ||| || || | | |||||||| | ||||| || || || | ||| | || || Sbjct 1737 GGCTACCGGGTCAACAAAATCCATATTTAAGCCATAGCACAACTTCTGTATACGCGAGGT 1678 Query 49148 AATTTTATCAAACATTATATTCTCTTTACGACCGTCACGTTTTATAACAAA 49198 |||||||||||| || | || || || || || ||||| | |||||| Sbjct 1677 AATTTTATCAAAATGTACCTCTTCCTTGCGTCCATCTCGTTTAAGAACAAA 1627 >seq172082 Length=56793 Score = 318 bits (352), Expect = 7e-82 Identities = 492/700 (70%), Gaps = 2/700 (0%) Strand=Plus/Plus Query 18795 ATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAATTTAAC 18854 ||| || ||||| | ||||||| ||||| | ||||||||| || || || || || Sbjct 14680 ATCGGCCACAAACTCAATATATTCCGACATCAATTTACAATTCATACCAATCAAATTTAC 14739 Query 18855 AGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATAGATAC 18914 ||||| |||||||| | ||||| ||||| || ||||| ||||| || || || | Sbjct 14740 GGGTAGAGCATCTGTTAAGAATTCCTGTTCAATTTTTACCGCCTCCGAAATGATTTCAAT 14799 Query 18915 AACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAAATCACA 18974 || |||||| | ||||| | | || | |||||||||||| ||| ||||||||||| Sbjct 14800 AATTCTATCCCTACTAGGACGTTGTACCAAATGTTTAAACATTAAAACAGCAAAATCACA 14859 Query 18975 ATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCC 19034 ||||| ||||| || | ||||||||||| || ||||| | |||||||| || || Sbjct 14860 ATGTAAACCCTCATCACGTGAGATCAATTCATTGGAGAATGTAAGGCCAGGCATAAGACC 14919 Query 19035 TCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGC 19094 | ||| || | ||| ||||| |||||||| ||| ||||| ||||| || || || Sbjct 14920 ACGTTTCTTGAGCCAAAATATCGAAGCAAAACTACCACTGAAGAAAATACCCTCGACAGC 14979 Query 19095 TGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATG-AATCCATTTCAGTG 19153 ||||| |||| | | || ||| || |||| ||| ||| |||||| || | Sbjct 14980 AGCAAATGCAATAATACGCTCACCAAAATTAGC-CGATTTAGATGAAATCCAAGACATGG 15038 Query 19154 CCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACATAC 19213 ||||||| ||||| || ||| |||||| || || |||| |||||||||||| | Sbjct 15039 CCCAATCGGCCTTACGCTTAACAGCTGGCATAGTTTCAATAGCATTAAATAGATATTCTC 15098 Query 19214 GCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATAT 19273 | | ||| ||| |||| || | || || || | ||| |||||||| || || | || Sbjct 15099 GTTGATCACGATCCTTAATGTAAGTGTCAATTAAAATACTATACATTTCGGAGTGTACAT 15158 Query 19274 TTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTAC 19333 |||| || || || || || || || ||||| | || ||||||| || || || Sbjct 15159 TTTCCATGGCAATTTGGAAACCATAGAAACAACGAGCCTCTGTTACTTGCACCTCTTGGG 15218 Query 19334 AAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATA 19393 | || | ||| || | ||||||||||||||| ||||| ||| ||||| ||||| | | Sbjct 15219 AGAAACGTTCAACAAGATTTTCATTAACTATACCATCGGAAGCGGCAAAGAATGCCAGAA 15278 Query 19394 CATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATTCCAATCATTAATATCTTTAG 19453 | ||| ||||||||| ||||| ||| | | | | ||| ||| | |||| || | Sbjct 15279 CGTGTGAAATAAAATGACGTTCATTGTCGGTAAGTCTTTCCCAGTCAGAATTATCCTTGG 15338 Query 19454 ATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGC 19493 | | ||| ||||| ||||| |||||||| || || || || Sbjct 15339 AGAGATCAACTTCCTCAACGGTCCAAAAGGATGCTTCAGC 15378 >seq123671 Length=1854 Score = 201 bits (222), Expect = 1e-46 Identities = 437/643 (68%), Gaps = 17/643 (3%) Strand=Plus/Plus Query 48164 TTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATC 48223 ||| |||||||| | | |||||| | |||| |||| |||||| |||||| | || Sbjct 1200 TTCGTTAGGACAGAAAAGTGACCACTGTCCATCCTTTTCTACTCTTTCCATAAACAAGTC 1259 Query 48224 TGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCT 48283 || ||||| ||| ||| ||| | ||| || ||||| | || || || |||| | Sbjct 1260 AGGAATCCATAGACCTAAAAAAAGATCTCTTGTTCTCATCTCATCTAAACCTGTATTTTT 1319 Query 48284 TTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTAC 48343 | |||||| | ||| || | ||||| |||||||||||||| || || | ||| ||| Sbjct 1320 TCGAAGTTCTAAAAATTCAAAGATATCTGCATGCCATGGTTCCAAGTAAACTGCAATTGA 1379 Query 48344 ACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAA 48403 ||||||| ||||||||| ||||| || | ||||| |||||| ||| | | ||| ||| Sbjct 1380 TCCTGGTCTTTTATTACCGCCTTGGTCAACGTATCTTGCAGTACTGTCAAACACTTTTAG 1439 Query 48404 CATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAA-TAT--AACTTCCACTAGC 48460 ||| || ||||| ||||| ||||||||||| |||| ||| ||| || | || Sbjct 1440 CATAGGTACAATGCCATTGCTAATACCATTGGT---AGAAACTATTCTACTGCCTGTTGC 1496 Query 48461 TCTTATATTACTAAT-TGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACC 48519 || ||| ||| || | ||| || |||||||| | |||| ||| | |||||| | Sbjct 1497 TCGTATTTTATGGATATTTAAT-CCAATACCACCAGAGCTTTTGCTTATCAAAGCACAGC 1555 Query 48520 GTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAAC--- 48576 || | | ||||| || ||||||| || |||||||||| ||| | | | |||| Sbjct 1556 GTGTCAATGTATCGTATATTCCTTGGATGCTATCATCTACCATGTCAAGCAAGAAACATG 1615 Query 48577 AACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAA 48636 ||||| | | ||| | | | | ||||| ||| || | ||| |||| |||||| ||| Sbjct 1616 AACTAAGCTGTGGCG--TTA-ATGATCCTGCATTGAACAGTGTAGGAGTTGCATGTGTAA 1672 Query 48637 ACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTA 48696 | | ||| ||| | || ||| | | || | || || | ||||| |||| Sbjct 1673 AATACCTCTGTGACATGCATGAATAGGATGTTATTGCCTTTTCAATGT--CATTG-TGTA 1729 Query 48697 TACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTT 48756 || | || || ||||| ||||| | || |||||||||| | || ||||| Sbjct 1730 TAAACAAGGACACTCGCATAAACATGTCCTGTGGTCTTTCAATCAAAACACCATCTATTT 1789 Query 48757 TCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTT 48799 | |||||||||| || |||||| |||| ||||| || || Sbjct 1790 TGTAAAGATATGACCTTATCAATGTCTTAATTCCAAAGTAATT 1832 Score = 104 bits (114), Expect = 3e-17 Identities = 132/178 (74%), Gaps = 4/178 (2%) Strand=Plus/Plus Query 47888 TGCTAGATTACATACAGCTACCTCAT-TTGGATTAGTATATTGTATTATTTCAGCACATA 47946 ||||| ||||| |||||||| |||| || | || ||||| | || |||||||| |||| Sbjct 636 TGCTAAGTTACAAACAGCTACTTCATCTTTGCTT-GTATACTCTAATATTTCAGTGCATA 694 Query 47947 GATTACCACATTTGA-TAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCC 48005 |||| | ||| | || | || ||||| | ||||| || | ||| ||||| ||| Sbjct 695 AGTTACTTCCTTTCAATACT-CCTAAATTCTTCTGATTGTTCTTTTCGTTGCATGCATCC 753 Query 48006 TTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAA 48063 |||||||||||| | || | || ||||| ||||| | |||||| || | |||||||| Sbjct 754 TTGTAAAGCATATACGGATTGCCTGTTTCAATCTGTGCTTCAATAATTGCTTTCCAAA 811 >seq133038 Length=544 Score = 159 bits (176), Expect = 4e-34 Identities = 269/384 (70%), Gaps = 8/384 (2%) Strand=Plus/Plus Query 48164 TTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATC 48223 ||| |||||||| | || |||||| | |||| |||| |||||| |||||| | || Sbjct 162 TTCGTTAGGACAGAACAGTGACCATTGTCCATCCTTTTCTACTCTTTCCATAAACAAGTC 221 Query 48224 TGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCT 48283 || ||||| ||| ||| || | ||| || ||||| | || || || |||| | Sbjct 222 AGGAATCCATAGACCTAAGAAAAGATCTCTTGTTCTCATCTCATCTAAACCTGTATTTTT 281 Query 48284 TTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTAC 48343 | |||||| ||||| || | ||||| |||||||||||||| || || | ||| ||| Sbjct 282 TCGAAGTTCTAGAAATTCAAAGATATCTGCATGCCATGGTTCCAAGTAAACTGCAATTGA 341 Query 48344 ACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAA 48403 ||||||| ||||||||| ||||| || | || || ||||| ||| | | || ||| Sbjct 342 TCCTGGTCTTTTATTACCGCCTTGGTCAACGTACCTTGCAGTGCTGTCAAATACCTTTAG 401 Query 48404 CATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAA-TAT--AACTTCCACTAGC 48460 ||| || ||||| ||||| ||||||||||| |||| ||| ||| || | || Sbjct 402 CATAGGTACAATGCCATTGCTAATACCATTGGT---AGAAACTATTCTACTGCCCGTTGC 458 Query 48461 TCTTATATTACTAAT-TGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACC 48519 || ||| ||| || | ||| ||||||||||| | |||| ||| | |||||| | Sbjct 459 TCGTATTTTATGGATATTTAAT-CCTATACCACCAGAGCTTTTGCTTATCAAAGCACAGC 517 Query 48520 GTTTAAGGGTATCATAAATTCCTT 48543 || | | ||||| || || |||| Sbjct 518 GTGTCAATGTATCGTATATCCCTT 541 >seq98949 Length=1124 Score = 141 bits (156), Expect = 1e-28 Identities = 314/464 (68%), Gaps = 13/464 (3%) Strand=Plus/Minus Query 47010 TTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATA 47069 || |||| || ||||||||||| ||||| | || ||||| ||||| ||||||||| Sbjct 1075 TTAGTTCTTAGGTAATACATACCCGTCTTCAGTCCCTTTCTCCACCCATAAAAATGCATA 1016 Query 47070 CTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCA 47129 || | ||||||||| ||||| | || | | ||||||| || ||||||| Sbjct 1015 GATGTAAGTTTAGAATATGTAGGTGCACCAACAAATAGATTAAGACTCTGTGACTGATCA 956 Query 47130 ATAAATGCACCTCTATCAGCTGCCATATCTAAAA--TAACCCTTTGTGGTATCTCCCATA 47187 ||||||| || | ||||||||||||||| | || | | | | | ||| |||||| Sbjct 955 ATAAATGGTCCACGATCAGCTGCCATATCAAGAACGCATCTCATACT--TATTTCCCATG 898 Query 47188 CTGTTTTATAAATTTGTTTAATGTCTTCTGGGA--GATTAGTATTT--TGAATAGATCCT 47243 | ||||| || ||| || || |||| || | |||| ||||| ||||| || ||| Sbjct 897 CAGTTTTGTATTTTTCCTTTATTTCTTTAGGAATTGATT-CTATTTTCTGAATCGAACCT 839 Query 47244 CCgttttctataattttgttttttaattcatttgaccaaagttttcgttcagttaatgtt 47303 | | ||| ||||| ||| || | ||| | || ||| | ||| || | | | | Sbjct 838 TCATGTTCAATAATAAGGTTCTTAATTTCTTGTGTCCATAAATTTAGTCTA--ACAAGAT 781 Query 47304 tttaaAAGATG--AGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATA 47361 || || ||| ||||| ||||| || | |||| ||| |||||| ||| | Sbjct 780 CTTCAAGCATGTATTTGTTAACGATTTGGAAATTGCCAGCAAGTGTTCTACGAGAATAGA 721 Query 47362 TATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTG 47421 |||| |||||| ||||||| | | |||| || || | ||| || || ||| | Sbjct 720 TATTGCTTGTAAATGGTTCAAAACATTCGTTGAAACCGAGAATCTGGCTTGTACTTGCGG 661 Query 47422 TAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTT 47465 | ||||| | ||| | |||||| |||||||||| ||||| |||| Sbjct 660 TTGGCATAGGTGCTATTAATAAACTATTTCTTAATCCATGTTTT 617 >seq140204 Length=1003 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/139 (75%), Gaps = 4/139 (3%) Strand=Plus/Plus Query 47022 TAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTA 47081 ||||||||||||||||| | || ||||| ||||| ||||||||| || | |||| Sbjct 250 TAATACATACCAGTCTTCAGTCCCTTTCTCCACCCATAAAAATGCATAGATGTAAGTTTA 309 Query 47082 GAATAACTAGGTTCTGAAATATGAAT--ATTAAGAGATTGACTCTGATCAATAAATGCAC 47139 ||||| ||||| | | || ||| ||||||| || |||||||||||||| | Sbjct 310 GAATATGTAGGTGC--ACCTACAAATAGATTAAGACTCTGTGACTGATCAATAAATGGCC 367 Query 47140 CTCTATCAGCTGCCATATC 47158 | | ||||||||||||||| Sbjct 368 CACGATCAGCTGCCATATC 386 Score = 86.0 bits (94), Expect = 7e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 47319 TTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGT 47378 ||||||||||| || | |||| ||| |||||| ||| ||||| || ||| ||||| Sbjct 461 TTAACAATTTGGAAATTGCCAGCAAGTGTTCTACGAGAATAAATATTGCTAGTAAATGGT 520 Query 47379 TCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACT 47438 || | | |||||||| |||| ||| || || ||| || ||||| | ||| | | Sbjct 521 TCAAAACATTCATTAAAACCAAGAATCTGGCTTGTACTTGCGGTTGGCATAGGTGCTATT 580 Query 47439 AATAAGCTATTTCTTACTCCATATTTT 47465 ||||| |||||||| | ||||| |||| Sbjct 581 AATAAACTATTTCTCAATCCATGTTTT 607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560756506754400