Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq172082 107 4e-18 >seq172082 Length=56793 Score = 107 bits (118), Expect = 4e-18 Identities = 302/445 (68%), Gaps = 24/445 (5%) Strand=Plus/Minus Query 25595 ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGAT 25654 |||| ||||||||||||| || || ||||||||||| || || ||||| || | | Sbjct 15281 ACGTTCTGGCATTCTTTGCCGCTTCCGATGGTATAGTTAATGAAAATCTTGTTGAACGTT 15222 Query 25655 TCACCAGGGAAGTGC-AGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 || || || |||| |||| ||||| |||||||| |||||||| || ||||| Sbjct 15221 TCTCCCAAGAGGTGCAAGTA-ACAGAGGCTCGTTGTTTCTATGGTTTCCAAATTGCCATG 15163 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGA-CG- 25768 |||||||| ||||| || ||||| | || | || || ||||||| || || Sbjct 15162 GAAAATGTACACTCCGAAATGTAT---AGTATTTTAATTGACACTTACATTAAGGATCGT 15106 Query 25769 --TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGC-ATCAAGAGGA 25825 || ||||| | || || ||| ||| || || || ||||| | ||| | | Sbjct 15105 GATCAACGAGA-ATAT---CTATTTAATGCTATTGA-AACTATGCCAGCTGTTAAGCGTA 15051 Query 25826 AGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGC-GCTACGTTTGGCGAGCGGCTG 25884 |||| ||||||||| ||||| || | | | | |||| ||||| ||||| | Sbjct 15050 AGGCCGATTGGGCCATGTCTTGGAT-TTCATCTAAATCGGCTAATTTTGGTGAGCGTATT 14992 Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 | || ||||||||||| ||||| || || ||||| ||| ||||| | || || ||| Sbjct 14991 ATTGCATTTGCTGCTGTCGAGGGTATTTTCTTCAGTGGTAGTTTTGCTTCGATATTTTGG 14932 Query 25945 CTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTAC-TTTTCCAACGAGCTCATCAGCAGGG 26002 |||||| | | | || | ||||| || || ||| || ||||| || | ||| | | Sbjct 14931 CTCAAG-AAACGTGGTCTTATGCCTGGCCT-TACATTCTCCAATGAATTGATCTCACGTG 14874 Query 26003 ACGAGGGTCTCCACAGAGATTTTGC 26027 | |||||| | || | |||||||| Sbjct 14873 ATGAGGGTTTACATTGTGATTTTGC 14849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 926610231622400