Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq173136 132 2e-26 seq123671 95.1 6e-15 seq133038 82.4 4e-11 >seq173136 Length=30018 Score = 132 bits (146), Expect = 2e-26 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951 ||||| | ||| ||| ||| | |||| || ||| | | |||||| || || |||||| Sbjct 2681 GGACACATTAAGGACCAGTCACCGTTTTCTTCTACTCTTTTCATAAACAAGTCGGGAATC 2622 Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011 || | |||||||| | |||||| ||||| |||||||| || ||| || |||| | Sbjct 2621 CATAAAGCATAAAAAAGATCTCTAGCTCTGTGCTCTTCTTTACCAGTATTTTTCTTTAAA 2562 Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071 ||||| || |||||||||||||| ||||| ||||| ||||| |||||||| || Sbjct 2561 TCTAAAAATTCAAAAATATCTGAATGCCAAGGTTCCAAATAAATAGCAAAGGCTCCAGGA 2502 Query 26072 CTTTTTCCTCCACCTTGATCTACGTA 26097 | ||| || |||||||| ||||| || Sbjct 2501 CGTTTGCCACCACCTTGGTCTACATA 2476 >seq123671 Length=1854 Score = 95.1 bits (104), Expect = 6e-15 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981 || ||| | |||||||| || || |||||||| | | |||| | |||||| | |||| Sbjct 1237 TCTACTCTTTCCATAAACAAGTCAGGAATCCATAGACCTAAAAAAAGATCTCTTGTTCTC 1296 Query 25982 ATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCAT 26041 || || ||| || ||| ||| || ||||| || ||||| ||||||| |||||| Sbjct 1297 ATCTCATCTAAACCTGTATTTTTTCGAAGTTCTAAAAATTCAAAGATATCTGCATGCCAT 1356 Query 26042 GGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTT 26101 ||||| || || | |||| ||| |||||| || ||||| || ||||||||| Sbjct 1357 GGTTCCAAGTAAACTGCAATTGATCCTGGTCTTTTATTACCGCCTTGGTCAACGTATCTT 1416 Query 26102 GCAGT 26106 ||||| Sbjct 1417 GCAGT 1421 >seq133038 Length=544 Score = 82.4 bits (90), Expect = 4e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981 || ||| | |||||||| || || |||||||| | | | || | |||||| | |||| Sbjct 199 TCTACTCTTTCCATAAACAAGTCAGGAATCCATAGACCTAAGAAAAGATCTCTTGTTCTC 258 Query 25982 ATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCAT 26041 || || ||| || ||| ||| || |||| || ||||| ||||||| |||||| Sbjct 259 ATCTCATCTAAACCTGTATTTTTTCGAAGTTCTAGAAATTCAAAGATATCTGCATGCCAT 318 Query 26042 GGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTT 26101 ||||| || || | |||| ||| |||||| || ||||| || ||||| ||| Sbjct 319 GGTTCCAAGTAAACTGCAATTGATCCTGGTCTTTTATTACCGCCTTGGTCAACGTACCTT 378 Query 26102 GCAGT 26106 ||||| Sbjct 379 GCAGT 383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252446467794500