Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq175763 122 1e-22 >seq175763 Length=14424 Score = 122 bits (134), Expect = 1e-22 Identities = 176/242 (73%), Gaps = 6/242 (2%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||| ||||| | |||||||| ||||| || || ||||||||||| || || || Sbjct 5844 ACGCCAATTGGACCCATACCAGGACCGCCACCACCGTGAGGAATACAGAACGTTTTGTGC 5785 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 ||||||| ||| ||||||| || ||||||| || | |||||| || ||| Sbjct 5784 AAATTTAAATGTGATACATCACTGCCGTAGTCACCAGGGCGGCACAAACCTACTTGAGCA 5725 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTC-ATGAA--CGATCTTACAT 138359 || | ||| || ||||| ||||| || || || ||| |||| ||||| |||| | || Sbjct 5724 TTCATATTGGCGCCATCAAGATAAACTTGTCCTCCA-TGTCTATGAATTAGATCGCAAAT 5666 Query 138360 ATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACAT 138419 ||| | | ||||| || ||| | |||| ||||| |||||||||||||| | |||| Sbjct 5665 ATCAG-CCACTGTTTCTTCGAAAACCCCCAT-TGTCGAGGGATATGTAATCATTAAACAT 5608 Query 138420 GA 138421 || Sbjct 5607 GA 5606 Score = 91.5 bits (100), Expect = 2e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319 || || || | ||||||||| |||||| | | |||||||| || | | |||||| Sbjct 4737 AGGCCTTCAGGACCATGATAAATTGCATACATCGCTGACATATTAGCCAATAATGCTTGG 4678 Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379 || || || |||||||| || ||||| ||||| | |||||| || || | || |||||| Sbjct 4677 GCAGTACATATGTTACTCGTAGCTTTATCTCTACGAATATGTTGTTCACGGGTCTGTAGT 4618 Query 139380 GCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGT 139439 ||||| | ||||| ||||| || |||| || ||||| ||||| ||||| Sbjct 4617 GCTAAGCGATATGCGTCGTTGCCATCCATGTCTCTTGTTACACCTATCATTCTCCCAGGC 4558 Query 139440 ATC 139442 ||| Sbjct 4557 ATC 4555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577605474599200