Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq191265 158 2e-33 >seq191265 Length=39239 Score = 158 bits (174), Expect = 2e-33 Identities = 328/482 (68%), Gaps = 15/482 (3%) Strand=Plus/Plus Query 47599 TTTGCCTTAGAGGCATCACCTAATAAGGTCTCTACTTCAGCAGGACGGAAATATTTAGAG 47658 ||||| || || |||||||| || || |||||||| | |||||||||||||| | Sbjct 17756 TTTGCTTTCGAAGCATCACCCAACAAAAGATCTACTTCGGTGGGACGGAAATATTTCGGA 17815 Query 47659 TCAATTCTGATAACCGTTTTACCATCAGAATC------AATACCAACTTCATCAAGACCA 47712 | || | | | ||| || | ||| ||| ||||||||||||||| | ||| Sbjct 17816 TTTATACGTACA--CGTACAAC-ACCAGTATCCTGTTCAATACCAACTTCATCCACACCT 17872 Query 47713 GAACCTTCCCATCTAATATTCATATCAAA-ATAAGGTGCAGATTCCTCAACAAACTGACG 47771 ||||| |||| ||| || | || | |||| | ||| |||||||||| | || Sbjct 17873 TCACCTTGCCATACAAT-TTGACGTCCTATATAACGAAAAGAGGCCTCAACAAATTCTCG 17931 Query 47772 GACAGAATATTGATTTCCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCAT 47831 ||| || | ||| |||||||| ||| | || ||| || |||| | ||| Sbjct 17932 TACACTATGAGTCTCTCCAGTGGCAATGACATAGTCCGAGGGTGTATCACGTTGCAACAT 17991 Query 47832 TAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATT 47891 | |||||||||||| |||||||| ||||||| ||||| ||||| || ||| | ||| Sbjct 17992 CATCCACATAGCCTCTACATAATCCATGGCATGGCCCCAATCACGTTTTGAATCTAAATT 18051 Query 47892 TCCTAGATATAAACAGTCTTGCTTACCTTCAGAGATTGCTTTTAAT--GCTCTTGTAATC 47949 || | | ||| | || | | || ||| | ||| | | | |||||| Sbjct 18052 ACCCAATTCAAAATATTCCAATTGA--TTGAGATAAATCTTGGCAACGGAACGTGTAATT 18109 Query 47950 TTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTA 48009 ||||| || |||||| ||||||| | ||| || ||||| ||||| || || |||||| | Sbjct 18110 TTACGTGTCACAAAATTTTCACCTCTTCTAGGTGATTCGTGATTGAAGAGTATACCATTG 18169 Query 48010 CAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTT 48069 |||||| |||| ||| | |||||||||||| | || |||||| | ||||| | ||| Sbjct 18170 CAGGCAAACATATTGTAGGCTTCACGATAGTTTATAACAATCCAGAAACCATACATTTTG 18229 Query 48070 GC 48071 || Sbjct 18230 GC 18231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 663893386847200