Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq175891 181 2e-40 seq172082 178 3e-39 seq188148 154 3e-32 seq5262 136 8e-27 seq185055 111 3e-19 seq151072 91.5 3e-13 seq22680 89.7 1e-12 >seq175891 Length=10111 Score = 181 bits (200), Expect = 2e-40 Identities = 178/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| || | |||||||||||||| || | |||| ||||| ||| || ||||| Sbjct 8775 ATACCTCCACGGAGACGTAATACTAAGTGAAGGGTAGATTCTTTTTGGATGTTGTAATCG 8716 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || ||||| ||| |||| ||||||||||||||||| |||||||| | ||||||||| || Sbjct 8715 GACAATGTACGTCCATCTTCCAATTGTTTACCAGCGAAGATTAAACGCTGTTGATCTGGG 8656 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| ||||| ||| || || ||||| ||| || | ||| Sbjct 8655 GGAATACCTTCTTTGTCTTGGATTTTGGCTTTAACGTTTTCTATAGTATCCGAAGGTTCA 8596 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || ||||| ||||| ||||| || ||||| ||||||| || || ||||| Sbjct 8595 ACCTCTAGTGTAATTGTTTTTCCCGTTAAGGTTTTAACGAAAATTTGCAT 8546 Score = 158 bits (174), Expect = 2e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | | ||||||||| ||||| || || | ||||| ||||| |||||| Sbjct 8547 ATGCCACCACGTAAACGTAATACCAAATGCAATGTGGATTCTTTTTGAATATTGTAATCA 8488 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || ||||| || | || ||||||||||| |||||||| || || | |||||||| || Sbjct 8487 GACAATGTGCGCCCGTCTTCCAATTGTTTGCCAGCAAAAATCAAACGTTGTTGATCTGGG 8428 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| || ||||| |||||| ||||||||| |||| ||| || | || Sbjct 8427 GGGATTCCTTCCTTGTCTTGAATTTTAGCTTTTACATTTTCAATAGTATCGGAAGGCTCA 8368 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||| |||||||| ||||| ||||| || | ||| || ||||| Sbjct 8367 ACCTCCAAAGTGATGGTTTTGCCAGTCAATGTCTTGACAAAGATTTGCAT 8318 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | |||||||||||||| || | |||| ||||| ||| || || || Sbjct 9003 ATACCACCACGGAGACGTAATACTAAGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCC 8944 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || ||||| || |||| |||||||||||||||||||||||||| | |||||||| || Sbjct 8943 GACAATGTACGGCCATCTTCCAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGG 8884 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| |||||| || || || || | ||| || | || Sbjct 8883 GGAATACCTTCTTTGTCTTGGATTTTAGCCTTGACGTTTTCAATGGTATCAGATGGCTCA 8824 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| || || || || || ||||| || || | ||| || ||||| Sbjct 8823 ACTTCTAAGGTGATAGTCTTGCCGGTTAAAGTCTTTACAAAAATTTGCAT 8774 Score = 145 bits (160), Expect = 1e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | |||||| || || || || | |||| || || ||| ||||||||| Sbjct 9231 ATACCACCACGAAGACGCAAAACCAAGTGAAGGGTAGATTCCTTTTGGATGTTATAATCA 9172 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || ||||| ||| |||| ||||| || ||||| || || || || | ||||| || || Sbjct 9171 GACAATGTACGTCCATCTTCCAACTGCTTACCGGCGAAAATCAAACGTTGTTGGTCTGGG 9112 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| ||||| || |||||| |||||||| ||||| ||| || | ||| Sbjct 9111 GGAATACCTTCCTTATCCTGGATTTTAGCCTTTACATTCTCTATAGTATCAGATGGCTCT 9052 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || || ||||| ||||| || ||||| | ||| || ||||| Sbjct 9051 ACTTCCAAGGTGATAGTTTTTCCAGTCAAGGTTTTCACAAAGATTTGCAT 9002 Score = 136 bits (150), Expect = 8e-27 Identities = 170/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | |||||||| || ||||| | |||| ||||| || || ||||| Sbjct 8319 ATACCACCACGAAGACGTAGAACCAAATGAAGTGTAGATTCTTTTTGAATGTTGTAATCG 8260 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || || ||| | || |||||||||||||| ||||| || || | |||||||| || Sbjct 8259 GACAAAGTGCGTCCGTCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGTTGATCTGGG 8200 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || |||||||| |||||| || || || |||| ||| || | ||| Sbjct 8199 GGAATACCCTCCTTATCTTGAATTTTAGCCTTGACGTTCTCAATAGTATCAGAAGGTTCG 8140 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || |||| || ||||| || |||||||| || || | || || |||||||| Sbjct 8139 ACCTCTAAGGTGATGGTCTTGCCAGTTAAGGTCTTCACGAAGATTTGCATTTT 8087 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||||| || || || || | |||| ||| || ||| |||||||| Sbjct 9687 ATACCACCACGGAGACGCAAAACCAAGTGAAGGGTAGACTCCTTTTGGATGTTATAATCG 9628 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || || ||| | || ||||||||||||||||| || || || | |||||||| || Sbjct 9627 GACAAAGTGCGTCCGTCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGA 9568 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| ||||| || ||||| || | ||| || | || Sbjct 9567 GGAATACCTTCTTTATCTTGGATTTTTGCCTTGACATTTTCAATGGTATCGGATGGCTCA 9508 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | ||| || || || || || || ||||| | || || ||||| Sbjct 9507 ACTTCCAAAGTGATAGTCTTGCCGGTCAAGGTTTTGACGAAGATTTGCAT 9458 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||||| || || || || | |||| || || ||| |||||||| Sbjct 9459 ATACCACCACGGAGACGCAAAACCAAGTGAAGGGTAGATTCCTTTTGGATGTTATAATCG 9400 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || || ||| |||| ||||| || ||||| || || || || | || ||||| || Sbjct 9399 GACAAAGTACGTCCATCTTCCAACTGCTTACCGGCGAAAATCAAACGTTGCTGATCTGGA 9340 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| |||||| || ||||| || | ||| || | ||| Sbjct 9339 GGAATACCTTCTTTATCTTGAATTTTAGCCTTGACATTTTCAATGGTATCAGATGGCTCT 9280 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | |||||||| || || || || || || | || || ||||| Sbjct 9279 ACTTCCAAGGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 9230 >seq172082 Length=56793 Score = 178 bits (196), Expect = 3e-39 Identities = 503/768 (65%), Gaps = 28/768 (4%) Strand=Plus/Plus Query 49596 AAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATC-AATACATATAATAATCT 49654 || ||| |||||||| | ||| || || |||| | || ||| || || || | Sbjct 14622 AACTCATATGGATTTGT--TATCATCTTACCTTTCCCACCTCCAATTCAACCAACAAACG 14679 Query 49655 ATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAATAATTTAAA 49714 |||||| ||||| |||| ||||| ||||| |||| |||||||||||| | || || | Sbjct 14680 ATCGGCCACAAACTCAATATATTCCGACATCAATTTACAATTCATACCAATCAAATTTAC 14739 Query 49715 TGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattatc---at 49771 |||| ||||| | ||||| | ||| |||| ||| || | ||| || || Sbjct 14740 GGGTAGAGCATCTGTTAAGAATTCCTGTTCAATTTTTACCGCCTCCGAAATGATTTCAAT 14799 Query 49772 aattatattattttttgataatttatatttaatatgattcgcatatattaaACATGCAAA 49831 |||| ||| | | | | || || ||| | || | | |||||| ||||| Sbjct 14800 AATTCTATCCCTACTAGG-ACGTTGTACCAAATGT--TT---AAACATTAAAACAGCAAA 14853 Query 49832 ATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCAT 49891 |||| |||||||||||| || | || || |||||||| || || | || ||||| Sbjct 14854 ATCACAATGTAAACCCTCATCACGTGAGATCAATTCATTGGAGAATGTAAGGCCAGGCAT 14913 Query 49892 TAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTC 49951 | || | || || ||||||||||| || |||||||||| | ||||| |||||||| Sbjct 14914 AAGACCACGTTTCTTGAGCCAAAATATCGAAGCAAAACTACCACTGAAGAAAATACCCTC 14973 Query 49952 GACACACGCAAATGCTATTATTCTTGCTCCAAACATTA----ATTTATCATCTAATATCC 50007 |||| |||||||| || || | | ||||| |||| |||| | | | |||| Sbjct 14974 GACAGCAGCAAATGCAATAATACGCTCACCAAA-ATTAGCCGATTT---AGATGAAATCC 15029 Query 50008 AATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATA 50067 || || |||||||| || || || | || || ||| |||| ||||| ||||||| Sbjct 15030 AAGACATGGCCCAATCGGCCTTACGCTTAACAGCTGGCATAGTTTCAATAGCATTAAATA 15089 Query 50068 ATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATTTCAG 50127 | | | || || ||||| | | ||||||||| | Sbjct 15090 GATATTCTCGTTGATCACGATCCTTAATGTAAGTGTCAATTAAAATACTATACATTTCGG 15149 Query 50128 AATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATAC-TGA 50186 | |||||| |||||| || ||||| || ||| || | || |||| ||| || Sbjct 15150 AGTGTACATTTTCCATGGCAATTTGGAAACCATAGAAACAACGAGCCTCTG-TTACTTGC 15208 Query 50187 ACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGAAG 50246 || || |||| |||||||| | ||| ||| || |||||||| || || || ||| Sbjct 15209 ACCTCTTGGGAGAAACGTTCAACAAGATTTTCATTAACTATACCATCGGAAGCGGCAAAG 15268 Query 50247 AATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAAATTTTCCCA---AGAT 50303 ||||| | ||||| | ||||||||| |||||| || | | ||||||| ||| Sbjct 15269 AATGCCAGAACGTGTGAAATAAAATGACGTTCATTGTCGGTAAGTCTTTCCCAGTCAGA- 15327 Query 50304 TCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCT 50351 | ||| || || | ||| ||||| || | |||||||| |||||| Sbjct 15328 --ATTATCCTTGGAGAGATCAACTTCCTCAACGGTCCAAAAGGATGCT 15373 >seq188148 Length=18106 Score = 154 bits (170), Expect = 3e-32 Identities = 177/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358 ||| ||| |||||||| | ||| || | ||| ||||||||||| | || || ||| | Sbjct 3602 GTTCAATGATACCACCACGAAGGCGGAGTACCAAATGTAAAGTGGATTCCTTTTGGATGT 3661 Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418 | || || || || || || |||| |||||||||||||| || ||||| || | |||| Sbjct 3662 TGTAGTCGGACAAGGTACGACCATCTTCCAATTGTTTACCGGCGAAGATCAAACGTTGTT 3721 Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478 |||| || || || |||||||| ||||| |||||| || ||||| || | || | Sbjct 3722 GATCTGGGGGGATACCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTGTCGG 3781 Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 | | || ||||| | |||||||||||||||||||| ||||| | || |||||||| Sbjct 3782 AAGGCTCGACTTCCAAGGTAATGGTTTTACCAGTTAAAGTTTTGACGAAGATCTGCAT 3839 >seq5262 Length=11329 Score = 136 bits (150), Expect = 8e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGA 192368 ||||| | |||||| || || || || || || | || ||| || ||||| || ||||| Sbjct 3152 CCACCACGAAGACGCAAAACCAAGTGCAATGTCGATTCCTTTTGA-ATATTGTAGTCAGA 3210 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | || || |||| ||||| ||||| |||||||| ||||| | || ||||| ||||| Sbjct 3211 AAGAGTACGACCATCTTCCAACTGTTTTCCAGCAAAAATTAAACGTTGCTGATCTGGTGG 3270 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 ||||| ||||| || || || || ||| ||||| || | ||| || | ||| || Sbjct 3271 AATTCCCTCTTTGTCCTGAATCTTGGCTTTAACATTTTCAATGGTATCAGAAGGTTCGAC 3330 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || || ||||| ||||| |||| ||||||| ||||||||||||| Sbjct 3331 CTCAAGTGTGATGGTCTTACCCGTTAGGGTTTTAACAAATATCTGCATT 3379 >seq185055 Length=12631 Score = 111 bits (122), Expect = 3e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 || || | |||||||| || ||||| | ||||| || || ||| || || ||||| Sbjct 12426 CCTCCGCGAAGACGTAGCACCAAATGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 12485 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | || || |||| || |||||||| ||||| ||||| || | |||||||| || || Sbjct 12486 AGAGTACGGCCATCCTCTAATTGTTTGCCAGCGAAGATCAAACGTTGTTGATCTGGGGGA 12545 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 || |||||||||||||| || ||| || ||||| || | ||| || | ||| ||| Sbjct 12546 ATGCCTTCTTTATCTTGGATCTTAGCCTTAACATTTTCAATGGTATCGGATGGTTCGACT 12605 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAA 192515 || | ||| || ||||| || || || Sbjct 12606 TCCAAAGTGATAGTTTTGCCGGTCAA 12631 >seq151072 Length=631 Score = 91.5 bits (100), Expect = 3e-13 Identities = 120/165 (73%), Gaps = 6/165 (4%) Strand=Plus/Minus Query 49815 tatattaaACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTA 49874 |||| ||||| ||||| ||| ||| | || ||||| || ||||| | |||||| || Sbjct 164 TATAACAAACAAGCAAACTCACAATGCATGCCTTCGTCTCTTGATATTAGTTCATTGCTG 105 Query 49875 AAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAA---AACTA 49931 |||| | ||||||||||| ||| || || | |||||| || | |||| ||| | Sbjct 104 TAAGTCAGACCTGGCATTAAGTTTCTTTTCTTCAACCAAAAGATAGCAGCAAATGAACCA 45 Query 49932 CTAGAAAAGAATATACCCTCGACACACGCAAATGCTATTATTCTT 49976 ||| ||||| ||||| || ||||| |||||||||| | |||| Sbjct 44 CTAAAAAAG---ATACCTTCAACACATGCAAATGCTAGCAATCTT 3 >seq22680 Length=2395 Score = 89.7 bits (98), Expect = 1e-12 Identities = 164/234 (70%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 192308 TACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT--CTTTAGAGATATTATAATC 192365 |||| ||||| || | || ||| | |||||| || || | |||| | ||| || || || Sbjct 773 TACCTCCTCTCAGTCTTAGTACCAGATGTAAGGT-GCTTTCCTTTTG-GATGTTGTAGTC 830 Query 192366 AGATAATGTTCGTTC-ATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAG 192424 | ||| | || ||| ||| || | |||||||| || || || ||||| ||||| || | Sbjct 831 -GTTAAGGGTCCTTCCATCCTCGAGCTGTTTACCTGCGAATATCAATCTTTGTTGGTCTG 889 Query 192425 GTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATT 192484 | || ||||||||||| ||||| || || |||||| || || | |||| || Sbjct 890 GAGGGATTCCTTCTTTGTCTTGGATCTTTGCTTTTACGTTTTCGATCGTGTCTGTGCTTT 949 Query 192485 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTT 192538 | || || | | || || || || |||| |||||| | ||| || ||||||| Sbjct 950 CGACCTCCAAGGCTATTGTCTTTCCTGTTAGTGTTTTGACAAAGATTTGCATTT 1003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982052376921000