Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq173136 167 7e-36 seq172937 131 5e-25 seq172236 118 3e-21 seq98949 114 4e-20 seq187911 87.8 5e-12 seq172118 87.8 5e-12 seq1591 86.0 2e-11 >seq173136 Length=30018 Score = 167 bits (184), Expect = 7e-36 Identities = 720/1126 (64%), Gaps = 13/1126 (1%) Strand=Plus/Minus Query 155400 AATGTGTCGGCTAAACCCTGAACTCCAATACCGACTGGGCGATGCCTGTAATT-GCTCCT 155458 || || || || |||||||| || || ||||| | |||||||| | ||| | | | Sbjct 3158 AAAGTATCAGCAAAACCCTGGACACCTATACCAATGGGGCGATGACGCAGATTAGAT--T 3101 Query 155459 GCTTGTCTTCTTGTTTGGG-TAAAAATTCACATCAATAATGTTATTTAAATTTGTAACCA 155517 ||| | ||| | ||| ||| |||| | || ||||| ||||||||||| | | Sbjct 3100 TCTTTGCCTCTGGCAGGGGATAATAATTTATGTCTATAATTTTATTTAAATTCCTGGTAA 3041 Query 155518 ATACCTTGGTTACGTCTGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAACA 155577 || || || || | | |||||| | |||| |||||||| || | ||||||| Sbjct 3040 TAACTTTAGTAACATTTTTCAATTTCTTAAAGTCGAATGTTTTCTCAGGTGTAACAAACA 2981 Query 155578 TACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTA 155637 || ||| |||| || |||| |||||| || || | || | | | | ||||||| Sbjct 2980 TATTAAGCGCAATGGAGGCCAAATTACAAACGGCTATTTCATCGGGGGCAGAATATTCTA 2921 Query 155638 CAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTAC 155697 |||| || |||||||| | || || ||||||| ||| | ||||||| || | Sbjct 2920 CAATTTCTGTACACAGGTTGCTGCATTTAATAGTGCCTATATTTTGCTGGTTACTCTTGC 2861 Query 155698 TGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAA 155757 ||||| ||||||||||||| ||||| || || || || || | || || || | | Sbjct 2860 GATTACAGGCATCCTTGTATAACATGTAGGGTGTACCAGTTTCTACTTGGGCCTCAATGA 2801 Query 155758 TCTTTAGCCAGAGGTCACGGGCATTAA-TTTGCTTGTTGTATCTGCCTTCCGACTCATAT 155816 | | ||| || | | || |||| ||| || | ||||||| ||||| Sbjct 2800 TGGCAAACCATAGAGCCTGTGCCTTAACAGTGC-GATTAGCTTTGCCTTCTTTTTCATAC 2742 Query 155817 TTCATATACAGC-GTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATC 155875 || |||||| | |||| | || ||||| | ||| ||| || || || |||| Sbjct 2741 TTGGTATACAACTGTTC-AAACTCTTCACCCCAGACATCCTGCAGGCCGGGACATTTATG 2683 Query 155876 GGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGC 155935 ||| || | | ||||| || | ||| | | |||||| | || Sbjct 2682 GGGACACATTAAGGACCAGTCACCGTTTTCTTCTACTCTTTTCATAAACAAGTCGGGAAT 2623 Query 155936 CCAAATAGCATAGAAAAGGTCCCTTGC-CTTTGACTCCTCATCGCCGTGATTCTTCCGTA 155994 ||| | |||||| ||||| || || || || || ||| || | || ||| ||| || Sbjct 2622 CCATAAAGCATAAAAAAGATCTCTAGCTCTGTG-CTCTTCTTTACCAGTATTTTTCTTTA 2564 Query 155995 GCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCAT 156054 ||||| ||||| |||||| | ||| || |||| ||| |||||||| ||| Sbjct 2563 AATCTAAAAATTCAAAAATATCTGAATGCCAAGGTTCCAAATAAATAGCAAAGGCTCCAG 2504 Query 156055 TCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAG 156111 | ||| ||||| || |||||||| || || ||||| || || | ||||| | Sbjct 2503 GACGTTTGCCACCACCTTGGTCTACATAACGGGCCACATTATTAAACACCCTAAGCATCG 2444 Query 156112 GAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACAT 156171 | | | |||||| || |||||||| ||||| ||| | ||| | | || | Sbjct 2443 GTACCAGACCATTAGAGGTGCCATTAGTTCCATCGATAGAAGTACCCTTGGCCCTAATAC 2384 Query 156172 TATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAG 156231 || | || || || |||||||| | | | || ||||| ||| |||| | || | Sbjct 2383 AGTGGACATTTATACCTATACCACCCGCCGACTTGGAAATCATAGCACATTGTTCCACCG 2324 Query 156232 TATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATT 156291 ||||||||||| |||||||||||| | |||| | | || |||| || |||| Sbjct 2323 ACTTGAAAATACCCTCAATAGAATCAGCCACCATAGTCAACAGGAAGCAAGAGGACAATT 2264 Query 156292 GAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAG 156351 | || | || |||| |||| || || | ||||| ||||||| | || Sbjct 2263 GTGGCCTATTAGTGGCAGCCGCAAATAACGTGGGCGAGGCATGGGTAAAATAACGCTCAG 2204 Query 156352 ACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGA 156411 ||| ||| || || || | | |||| || || || |||| |||| | Sbjct 2203 ACAACAAATTATACGTTTCTATGGCCGAATCAATATCCTCTCCATGTATACCTATAGCTA 2144 Query 156412 CCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATG 156471 ||||||| |||||||||| || | ||| |||||| |||| ||| ||| | || | Sbjct 2143 CCCTCATTAACATATGCTGTGGTCTCTCCACAATCTTACCATTCATTTTCAGTAAATACG 2084 Query 156472 CGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACG 156517 | ||||| |||||||| || ||||||| | | ||||||||| Sbjct 2083 ACCTCTCCAGTGTTTTAAAACCAAAATAATTATAACCAAAATCACG 2038 >seq172937 Length=23020 Score = 131 bits (144), Expect = 5e-25 Identities = 213/299 (71%), Gaps = 12/299 (4%) Strand=Plus/Plus Query 302574 TTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGT 302633 ||||||| ||| || | ||||||||| |||||||||||| || ||||||||||| || Sbjct 13115 TTCCATAGCCTTTATAAGACGACGCTGGATATAACCAGTTTCAGCAGTTTTTACAGCAGT 13174 Query 302634 ATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCG--GTCGT-AG 302690 ||| || ||||| |||||||||||||||| |||| ||||| ||| | | || | Sbjct 13175 ATCGATAAGACCTTCACGACCACCCATAGCGTGGA--AATAG-AATTCAGAAGGAGTCAA 13231 Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTT 302747 || | | | | || | || |||||||| | | ||| || || ||||||| || Sbjct 13232 ACCGGCCAGATATGAATTTTCTACGAAACCTCTAGACTCAGGACCGTAATCGTC---TTT 13288 Query 302748 GGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTT 302807 | | || ||||||||||| | || | || || |||||||| || || |||||||| Sbjct 13289 GATGAAATGTGGCAGGGTACGCTTACGGAAACCATAGGGGATACGTTTACCTTCAACGTT 13348 Query 302808 CTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAG 302866 ||| || |||| || | ||| | ||| |||||||| | || ||||| || |||| Sbjct 13349 CTGTTGACCCACACAAGCAATAACCTGAGAAATATTAATATTGGAACCCTTAGAACCAG 13407 Score = 86.0 bits (94), Expect = 2e-11 Identities = 115/159 (72%), Gaps = 11/159 (7%) Strand=Plus/Plus Query 303627 TTGGGGCATATGTAAATTCATCTCATCACCGTCAAAATCAGCATTATACGGCTTTGTGTC 303686 ||| |||| ||| |||||||| ||||| ||||||||||| |||||||| || || Sbjct 14277 TTGTGGCACATGCAAATTCATTTCATCTCCGTCAAAATCTGCATTATAGGGTGAGGTACA 14336 Query 303687 CGCAACGTTCATCCGGAAAGTATCACCCTG----CATCATAACACGGGCTTTATGACACA 303742 | | |||||| ||||| ||| ||| | | | ||||||| ||||| || Sbjct 14337 TGACAAGTTCATACGGAATGTA-GACCAAGGTAAAACCTTAACACG------ATGACCCA 14389 Query 303743 TCATAGACATTCTGTGTAGAGTTGGCTGACGATTGAAAA 303781 ||||| |||| | || | |||||||||||||||||||| Sbjct 14390 TCATACTCATTTTATGCAAAGTTGGCTGACGATTGAAAA 14428 >seq172236 Length=40455 Score = 118 bits (130), Expect = 3e-21 Identities = 215/315 (68%), Gaps = 0/315 (0%) Strand=Plus/Minus Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 ||| |||||||||||||| || ||||| | | ||| |||| ||||| || || ||||| Sbjct 10227 ACCCACAGCATCAATTTCATCGATGAACAAAATACAAGGAGCATTTTTTCGTGCCATTGC 10168 Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 || | |||| || | || | |||| ||| ||| ||||||| | || |||||| | Sbjct 10167 GAACATATCTCGCACTCTAGAAGGGCCAACACCCACAAACATTTCCAAGAACTCAGAACC 10108 Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 ||| || ||| || | |||||| ||||| || || || | || || | ||||| Sbjct 10107 GGAAACGGTAATAAAAGGTACATTGGCTTCTCCAGCGGTGGCTTTAGCAAGTAAAGTCTT 10048 Query 289209 ACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT 289268 || || ||||| || || ||| | |||| ||||||| ||| || || | | Sbjct 10047 TCCCGTACCAGGGGGACCAGTTAACATGGCTCCTTTTGGTATTTTGGCACCCAAATCAAT 9988 Query 289269 ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATC 289328 ||||| | ||| | || | ||| | ||| | ||| || |||| ||| ||||| || Sbjct 9987 ATATTGTTGAGGATTTTTGAGAAAGTTTACGAACTCCATAATTTCAATTTTGGCCTCTTC 9928 Query 289329 ACATCCTGCTACATC 289343 ||| || || ||||| Sbjct 9927 ACAGCCAGCAACATC 9913 >seq98949 Length=1124 Score = 114 bits (126), Expect = 4e-20 Identities = 310/461 (67%), Gaps = 24/461 (5%) Strand=Plus/Minus Query 154536 AGATAATAAATACCTGTCTTTAGCCCTGCCCGCCAACCATAGAAATGCATATTTGTTAAT 154595 || ||||| ||||| ||||| || || | ||| ||||| ||||||||| ||| | | Sbjct 1066 AGGTAATACATACCCGTCTTCAGTCCCTTTCTCCACCCATAAAAATGCATAGATGTAAGT 1007 Query 154596 GATTTAGGCTCTG--GGTCTTCCATCCA-TAAATTCATACTCTGCGATTGGCAAATATAT 154652 |||| | || ||| ||| | | || ||| | |||||| || || |||| || Sbjct 1006 ---TTAGAATATGTAGGTGCACCAACAAATAGATTAAGACTCTGTGACTGATCAATAAAT 950 Query 154653 AATCCGCGGTCACGAGCCATATCAATTA-GTGTCTTCATTTTAATTTCCCATACAATCTT 154711 ||| || ||| |||||||||| | | ||| ||| | ||||||||| || | || Sbjct 949 GGTCCACGATCAGCTGCCATATCAAGAACGCATCT-CATACTTATTTCCCATGCAGTTTT 891 Query 154712 GTATTTCTCTTTAATATGTTCTGGTAGTCCATCAATATATTGAA-CG---CTTCCCTTGT 154767 |||||| || || || | || || | | || || | |||| || |||| ||| Sbjct 890 GTATTTTTCCTTTATTTCTTTAGGAATTGATTCTATTTTCTGAATCGAACCTTCA--TGT 833 Query 154768 TGGCAATAATATTGTTCTTGACGCTTTCATC---CCATAGTTTTAGTGCCAGTAGTTCAT 154824 | |||||||| |||||| | |||| | ||||| |||||| | || || | Sbjct 832 T--CAATAATAAGGTTCTTAA---TTTCTTGTGTCCATAAATTTAGTCTAACAAGATCTT 778 Query 154825 CGACCAGATATTTATTAACCATC-GTAAATTCACCCGCCAGAGTTTTCCTGCTGTAAATA 154883 | | || ||||| ||||| || | ||||| || || || ||| | | || ||| Sbjct 777 CAAGCATGTATTTGTTAACGATTTGGAAATTG-CCAGCAAGTGTTCTACGAGAATAGATA 719 Query 154884 TTACTTGTAATTGGCTCAAAGCACTCGTTATTACCTAAAATCTGGCTTGTGCTTGCTGTA 154943 || ||||||| ||| ||||| || ||||| ||| | |||||||||||| ||||| || Sbjct 718 TTGCTTGTAAATGGTTCAAAACATTCGTTGAAACCGAGAATCTGGCTTGTACTTGCGGTT 659 Query 154944 GGCATGGGAGCACATAACAGACTGTTCCTGATTCCGTGCTT 154984 ||||| || || ||| | ||| || || | ||| || || Sbjct 658 GGCATAGGTGCTATTAATAAACTATTTCTTAATCCATGTTT 618 >seq187911 Length=32483 Score = 87.8 bits (96), Expect = 5e-12 Identities = 88/114 (77%), Gaps = 3/114 (3%) Strand=Plus/Plus Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874 |||||| ||||||| || ||||| |||| | || | |||| ||||| || ||||| Sbjct 3607 AATTTCCACAATACGTGGCACACCCTGGGTAATATT---CATGGAAGCAACTCCCGCAAA 3663 Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGC 301928 |||||||| ||||| || | ||||||| ||||||||||||||||| || || Sbjct 3664 ATGGAAAGTTTTCAGTGTCATTTGAGTACCCGGCTCACCAATACTTTGAGCAGC 3717 >seq172118 Length=30144 Score = 87.8 bits (96), Expect = 5e-12 Identities = 177/259 (68%), Gaps = 8/259 (3%) Strand=Plus/Minus Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 |||||| || | |||||| ||||| | || || ||| ||| | || || | | | Sbjct 10597 AAATAAATCACGTACACGTCTGGCTCCCTGGCCCACTAACACTTCATCGAACTCTGGACC 10538 Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 | | |||| |||| ||||||||||| || ||||||||||| |||| | || || Sbjct 10537 AGCGGCATGAAAAAATGGGACATTTGCTTCACCAGCTACTGCCCTGGCCAATAAGGTTTT 10478 Query 289209 ACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT 289268 || || ||||| || ||| |||||| |||||| ||||| | ||| ||| | | || Sbjct 10477 GCCCGTACCAGGAGGACCCACTAATAAAACTCCTTTTGGCAATTT---GCCACCTAAATT 10421 Query 289269 ---ATATTTCTCAGGGCTCTTTAA-AAATTCTACAATTTCCTCAAGTTCATATTTTGCCT 289324 | | || || ||| | ||||| ||||| || | ||| | | ||| | |||||| | Sbjct 10420 GGAAAACTTTTC-GGGATTTTTAAGGAATTCCACGACTTCTTTTAATTCTTGTTTTGCTT 10362 Query 289325 CATCACATCCTGCTACATC 289343 |||| || ||| ||||| Sbjct 10361 CATCGCAACCTTTGACATC 10343 >seq1591 Length=9061 Score = 86.0 bits (94), Expect = 2e-11 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 233290 ACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTTGACCTACCCTGGACTGT 233349 ||||||||||||||||||||| | ||| |||||||| || | || ||||| | Sbjct 3796 ACAATCACGTTCCATTTCACCCAAACGTAGACCACCTTCCCTACTTCTTCCCTGTGTGGG 3855 Query 233350 TTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATTAATTTTATCTTTAACCAT 233409 || || || ||||| | | | |||||| |||| | || |||||||||| ||||| Sbjct 3856 CTGTCGCGTCAAAACTGCTTTAGGACCCCGAGCTCTGGCATGCATTTTATCTTGCACCAT 3915 Query 233410 ATGCTTCAGTCTCATATAATAA 233431 ||||||||| || ||||||| Sbjct 3916 GTGCTTCAGTTTCTGATAATAA 3937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1468188254179020