Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq137448 89.7 3e-13 seq188148 84.2 1e-11 >seq137448 Length=735 Score = 89.7 bits (98), Expect = 3e-13 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 || || || |||| |||| || || || | || ||||||||||| || |||||||| Sbjct 26 TTACCACCTCTCAGTCTCAACACAAGATGTAAAGTACTCTCCTTCTGTATATTATAGTCA 85 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 || | | |||| || || ||||| || || || |||| || ||||||||| | Sbjct 86 TTTAATGTCCTTCCATCCTCAAGCTGCTTCCCTGCAAATATCAATCTTTGCTGGTCAGGA 145 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCT 34925 || | ||| || ||||| | |||||| || || || || || | ||| | | Sbjct 146 GGTATCCCTTCTTTGTCCTGTATTTTCGCCTTTAC--ATTCTCAATTGTATCACCCCCTT 203 Query 34926 CGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || || | || || |||||||||||||| || || |||||||| ||||| Sbjct 204 CAACTTCCAATGTAATTGTCTTTCCCGTGAGTGTTTTGACAAAGATTTGCAT 255 >seq188148 Length=18106 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| || ||||| ||||| || | | | || |||| |||| ||| || ||||||||| Sbjct 3649 TCCTTTTGGATGTTGTAGTCGGACAAGGTACGACCATCTTCCAATTGTTTACCGGCGAAG 3708 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| ||||| || ||| | || | || || ||||| | ||||| ||||| | Sbjct 3709 ATCAAACGTTGTTGATCTGGGGGGATACCTTCTTTGTCTTGGATTTTAGCCTTGACATTT 3768 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || | |||||| || | ||| ||||| || || || | || || || Sbjct 3769 TCAATGGTGTCGGAAGGCTCGACTTCCAAGGTAATGGTTTTACCAGTTAAAGTTTTGACG 3828 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 3829 AAGATCTGCAT 3839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324928852932740