Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq175891 86.0 5e-12 >seq175891 Length=10111 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| |||||||| || || || ||||||||||| || | || ||| || | Sbjct 8318 ATGCAAATCTTTGTCAAGACATTGACTGGCAAAACCATCACTTTGGAGGTTGAGCCTTCC 8377 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| | | | |||||| || ||| || || ||||| | ||| ||||| Sbjct 8378 GATACTATTGAAAATGTAAAAGCTAAAATTCAAGACAAGGAAGGAATCCCCCCAGATCAA 8437 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || | | |||| ||| || ||||| |||| |||| ||| || | || ||||| Sbjct 8438 CAACGTTTGATTTTTGCTGGCAAACAATTGGAAGACGGGCGCACATTGTCTGATTACAAT 8497 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTT 107767 |||||||| || || || ||||| |||| || Sbjct 8498 ATTCAAAAAGAATCCACATTGCATTTGGTATT 8529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397941192084940