Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq175891 141 1e-28 seq188148 116 6e-21 seq137448 116 6e-21 seq185055 107 3e-18 seq22680 104 4e-17 >seq175891 Length=10111 Score = 141 bits (156), Expect = 1e-28 Identities = 167/226 (74%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || ||||| || || ||||| || ||| | || || || | | || Sbjct 8319 TGCAAATCTTTGTCAAGACATTGACTGGCAAAACCATCACTTTGGAGGTTGAGCCTTCCG 8378 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| ||||||||||| |||||| ||| || ||||| || || || ||||||| Sbjct 8379 ATACTATTGAAAATGTAAAAGCTAAAATTCAAGACAAGGAAGGAATCCCCCCAGATCAAC 8438 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | |||||||| || |||||||| || || | || || | ||||| |||| Sbjct 8439 AACGTTTGATTTTTGCTGGCAAACAATTGGAAGACGGGCGCACATTGTCTGATTACAATA 8498 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||||||||| || | ||||| |||||||| ||| | || || Sbjct 8499 TTCAAAAAGAATCCACATTGCATTTGGTATTACGTTTACGTGGTGG 8544 Score = 141 bits (156), Expect = 1e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | ||||| ||||| |||||||||||||| | || || |||| | | Sbjct 8547 TGCAAATTTTCGTTAAAACCTTAACGGGAAAAACAATTACACTAGAGGTTGAACCTTCGG 8606 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||||||| |||| || ||| ||||| ||| |||||||| ||||| || ||||||| Sbjct 8607 ATACTATAGAAAACGTTAAAGCCAAAATCCAAGACAAAGAAGGTATTCCCCCAGATCAAC 8666 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | | || || || ||||||||||| || ||| | || || | ||||| || | Sbjct 8667 AGCGTTTAATCTTCGCTGGTAAACAATTGGAAGATGGACGTACATTGTCCGATTACAACA 8726 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||||||||| || | || ||||||||||| | | ||||||| Sbjct 8727 TCCAAAAAGAATCTACCCTTCACTTAGTATTACGTCTCCGTGGAGGTA 8774 Score = 111 bits (122), Expect = 2e-19 Identities = 153/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || || ||||| || || || || || | || || |||| | | Sbjct 8091 TGCAAATCTTCGTGAAGACCTTAACTGGCAAGACCATCACCTTAGAGGTCGAACCTTCTG 8150 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | || || || |||||| ||| ||| || || ||||| || ||||||| Sbjct 8151 ATACTATTGAGAACGTCAAGGCTAAAATTCAAGATAAGGAGGGTATTCCCCCAGATCAAC 8210 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | |||||||| ||||||||||| || || | || || | ||||| || | Sbjct 8211 AACGTTTGATTTTTGCCGGTAAACAATTGGAAGACGGACGCACTTTGTCCGATTACAACA 8270 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| || | ||||| || |||| Sbjct 8271 TTCAAAAAGAATCTACACTTCATTTGGTTCTACG 8304 Score = 111 bits (122), Expect = 2e-19 Identities = 153/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || |||| || ||||| || || || || || | || || || | | Sbjct 8775 TGCAAATTTTTGTAAAGACTTTAACCGGCAAGACTATCACCTTAGAAGTTGAGCCATCTG 8834 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| |||| || || |||||| ||| |||||||| ||||| || ||||||| Sbjct 8835 ATACCATTGAAAACGTCAAGGCTAAAATCCAAGACAAAGAAGGTATTCCCCCAGATCAAC 8894 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || ||||| ||||||||||| || ||| | || || | || || || | Sbjct 8895 AACGTTTAATCTTTGCTGGTAAACAATTGGAAGATGGCCGTACATTGTCGGACTACAACA 8954 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| || | || ||||||||||| Sbjct 8955 TCCAAAAAGAATCTACCCTTCACTTAGTATTACG 8988 Score = 107 bits (118), Expect = 3e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | ||||| || || || || || || ||| | || || || | || Sbjct 9459 TGCAAATCTTCGTCAAAACCTTGACCGGCAAGACTATCACTTTGGAAGTTGAGCCATCCG 9518 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| || ||||| ||| ||||||||| ||||| || ||||||| Sbjct 9519 ATACCATTGAAAATGTCAAGGCAAAAATCCAAGATAAAGAAGGTATTCCTCCAGATCAAC 9578 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | ||||| || ||||||||||| || || | || || | |||||||| | Sbjct 9579 AACGTTTGATTTTCGCTGGTAAACAATTGGAAGACGGACGCACTTTGTCCGATTATAACA 9638 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||| || || || | || || || || || Sbjct 9639 TCCAAAAGGAGTCTACCCTTCACTTGGTTTTGCG 9672 >seq188148 Length=18106 Score = 116 bits (128), Expect = 6e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| ||||| || ||||| ||||| | || || || | | || Sbjct 3838 TGCAGATCTTCGTCAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTCGAGCCTTCCG 3779 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| || |||||| ||| |||||||| || || || ||||||| Sbjct 3778 ACACCATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATCCCCCCAGATCAAC 3719 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || || || ||||||||||| || ||| | | || || | || || || | Sbjct 3718 AACGTTTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGTACCTTGTCCGACTACAACA 3659 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTA 146240 | ||||| ||||| ||| | ||||| ||| Sbjct 3658 TCCAAAAGGAATCCACTTTACATTTGGTA 3630 >seq137448 Length=735 Score = 116 bits (128), Expect = 6e-21 Identities = 169/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||| | || ||||| |||||||| | || || ||| | Sbjct 254 TGCAAATCTTTGTCAAAACACTCACGGGAAAGACAATTACATTGGAAGTTGAAGGGGGTG 195 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | |||||||| |||||||| |||||||| || || || || || | Sbjct 194 ATACAATTGAGAATGTAAAGGCGAAAATACAGGACAAAGAAGGGATACCTCCTGACCAGC 135 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | || |||||||| || || | || ||| || || |||| || ||||||| Sbjct 134 AAAGATTGATATTTGCAGGGAAGCAGCTTGAGGATGGAAGGACATTAAATGACTATAATA 75 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATTG 146270 |||| || || ||| | ||| | || || || | ||||| |||||||||| |||| Sbjct 74 TACAGAAGGAGAGTACTTTACATCTTGTGTTGAGACTGAGAGGTGGTAAATAAAGATTG 16 >seq185055 Length=12631 Score = 107 bits (118), Expect = 3e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 146052 TTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAATGTAAAA 146111 || || || ||||| || ||| | || || |||| |||||| ||| ||||||| || Sbjct 12631 TTGACCGGCAAAACTATCACTTTGGAAGTCGAACCATCCGATACCATTGAAAATGTTAAG 12572 Query 146112 AATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGT 146171 ||| || ||| ||||||||||||||| || ||||||||| | | || || || || Sbjct 12571 GCTAAGATCCAAGATAAAGAAGGCATTCCCCCAGATCAACAACGTTTGATCTTCGCTGGC 12512 Query 146172 AAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATC 146231 ||||||||||| ||| | || | | || || || || ||||| ||||| ||| || Sbjct 12511 AAACAATTAGAGGATGGCCGTACTCTGTCTGACTACAACATCCAAAAGGAATCTACTCTC 12452 Query 146232 CATTTAGTATTACG 146245 ||||| || |||| Sbjct 12451 CATTTGGTGCTACG 12438 >seq22680 Length=2395 Score = 104 bits (114), Expect = 4e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||| |||||||||| ||||| | | || || ||| | | Sbjct 1000 TGCAAATCTTTGTCAAAACACTAACAGGAAAGACAATAGCCTTGGAGGTCGAAAGCACAG 941 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || |||| |||||| || || ||| |||||||| || || || || |||| Sbjct 940 ACACGATCGAAAACGTAAAAGCAAAGATCCAAGACAAAGAAGGAATCCCTCCAGACCAAC 881 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACG-TTAACAGATTATAAT 146210 ||||| | || || ||||||||||| | || ||| || || ||||| || || || Sbjct 880 AAAGATTGATATTCGCAGGTAAACAGCTCGAGGATGGAAGGACCCTTAAC-GACTACAAC 822 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAA 146261 || ||||| ||| || | ||| | ||| || || | |||||||||||| Sbjct 821 ATCCAAAAGGAAAGCACCTTACATCTGGTACTAAGACTGAGAGGAGGTAAA 771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 784275080183200