Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq175891 156 3e-33 seq5262 152 4e-32 seq188148 140 2e-28 seq185055 114 1e-20 seq22680 102 6e-17 seq189465 87.8 1e-12 seq20636 86.0 5e-12 >seq175891 Length=10111 Score = 156 bits (172), Expect = 3e-33 Identities = 168/220 (76%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||||||||| || ||||||||||||||||| ||||| | | ||||| Sbjct 8305 ACGTAGAACCAAATGAAGTGTAGATTCTTTTTGAATGTTGTAATCGGACAAAGTGCGTCC 8246 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || | |||||| || ||| | ||||| | ||| ||||| || ||||||||||| || Sbjct 8245 GTCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGTTGATCTGGGGGAATACCCTCCTT 8186 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||||| |||||| | ||||| | || | ||| |||||| |||| || || | || | Sbjct 8185 ATCTTG-AATTTTAGCCTTGACGTTCTCAATAGTATCAGAAGGTTCGACCTCTAAGGTGA 8127 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | || |||||||||||||| || || || || |||||||| Sbjct 8126 TGGTCTTGCCAGTTAAGGTCTTCACGAAGATTTGCATTTT 8087 Score = 149 bits (164), Expect = 5e-31 Identities = 168/220 (76%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCG 29627 ||||| | |||||||| | ||||||||||||||||| || ||||| | ||||| |||| Sbjct 8535 AAACGTAATACCAAATGCAATGTGGATTCTTTTTGAATATTGTAATCAGACAATG-TGCG 8477 Query 29628 AGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTC 29687 || || | ||||||||||||| | ||||| | ||| ||||| || || || || || Sbjct 8476 CCCGTCTTCCAATTGTTTGCCAGCAAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTC 8417 Query 29688 TTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAG 29746 |||||||| |||||| | ||| ||| |||| | ||| || ||| | || || || | || Sbjct 8416 CTTGTCTTG-AATTTTAGCTTTTACATTTTCAATAGTATCGGAAGGCTCAACCTCCAAAG 8358 Query 29747 TTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || ||||||||||| || || || ||||| || ||||| Sbjct 8357 TGATGGTTTTGCCAGTCAATGTCTTGACAAAGATTTGCAT 8318 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-C 29618 ||||| | | ||| | || || ||||| || ||||||||||| ||||| ||||| | | Sbjct 8772 CCTCCACGGAGACGTAATACTAAGTGAAGGGTAGATTCTTTTTGGATGTTGTAATCGGAC 8713 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 |||| | || ||| || | |||||| ||||| | || || | || ||||| || || Sbjct 8712 AATG-TACGTCCATCTTCCAATTGTTTACCAGCGAAGATTAAACGCTGTTGATCTGGGGG 8654 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||| ||||||||||| | ||| ||| || |||||| ||| || ||| |||| || Sbjct 8653 AATACCTTCTTTGTCTTGGATTTTGGCTTTAACGTTTTCTATAGTATCCGAAGGTTCAAC 8594 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || ||||| || |||||||||||||| || || ||||| Sbjct 8593 CTCTAGTGTAATTGTTTTTCCCGTTAAGGTTTTAACGAAAATTTGCAT 8546 Score = 138 bits (152), Expect = 9e-28 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| ||||| ||||| || || || ||||| ||||||||||| | | ||||| Sbjct 9673 ACGCAAAACCAAGTGAAGGGTAGACTCCTTTTGGATGTTATAATCGGACAAAGTGCGTCC 9614 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || | |||||| ||||| | ||||| | ||| ||||| || |||||||| ||||| Sbjct 9613 GTCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCTTT 9554 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| | |||| |||||| |||| | || || || | || ||||| | ||| || Sbjct 9553 ATCTTGGATTTTTGCCTTGACATTTTCAATGGTATCGGATGGCTCAACTTCCAAAGTGAT 9494 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| ||||| || |||||||| || || || ||||| Sbjct 9493 AGTCTTGCCGGTCAAGGTTTTGACGAAGATTTGCAT 9458 Score = 132 bits (146), Expect = 4e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCGAGAATCATC 29636 || || ||||| || ||||||||||| ||||| || |||| ||||| | || ||| || Sbjct 8982 ACTAAGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGACAATG-TACGGCCATCTTC 8924 Query 29637 GAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 | |||||| |||||| | || || | ||| ||||| || |||||||| ||||||||||| Sbjct 8923 CAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGGGGAATACCTTCTTTGTCTTG 8864 Query 29697 TAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 | ||| ||||| |||| | || ||||| | || ||||| | || ||||| || Sbjct 8863 GATTTTAGCCTTGACGTTTTCAATGGTATCAGATGGCTCAACTTCTAAGGTGATAGTCTT 8804 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| ||||| || || ||||| || ||||| Sbjct 8803 GCCGGTTAAAGTCTTTACAAAAATTTGCAT 8774 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCGAG 29629 ||||| ||||| ||||| || ||||| ||||| ||||||||||| | |||| || || Sbjct 9217 ACGCAAAACCAAGTGAAGGGTAGATTCCTTTTGGATGTTATAATCAGACAAT-GTACGTC 9159 Query 29630 AATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTT 29689 ||| || | || || || || | ||||| | ||| || || || |||||||| || | Sbjct 9158 CATCTTCCAACTGCTTACCGGCGAAAATCAAACGTTGTTGGTCTGGGGGAATACCTTCCT 9099 Query 29690 TGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 | || || | ||| || ||| | |||| ||| ||||| | |||||||| | || | Sbjct 9098 TATCCTGGATTTTAGCCTTTACATTCTCTATAGTATCAGATGGCTCTACTTCCAAGGTGA 9039 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||| ||||| |||||||| ||||| || ||||| Sbjct 9038 TAGTTTTTCCAGTCAAGGTTTTCACAAAGATTTGCAT 9002 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| ||||| ||||| || ||||| ||||| ||||||||||| | | || || Sbjct 9445 ACGCAAAACCAAGTGAAGGGTAGATTCCTTTTGGATGTTATAATCGGACAAAGTACGTCC 9386 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | || || || || | ||||| | ||||||||| || |||||||| ||||| Sbjct 9385 ATCTTCCAACTGCTTACCGGCGAAAATCAAACGTTGCTGATCTGGAGGAATACCTTCTTT 9326 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||||| |||||| | |||||| |||| | || ||||| | |||||||| | || | Sbjct 9325 ATCTTG-AATTTTAGCCTTGACATTTTCAATGGTATCAGATGGCTCTACTTCCAAGGTAA 9267 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || ||||| || ||||| || || || || ||||| Sbjct 9266 TGGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 9230 >seq5262 Length=11329 Score = 152 bits (168), Expect = 4e-32 Identities = 166/218 (76%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| ||||| || | || ||||| |||||||| || || || | || || ||| Sbjct 3163 ACGCAAAACCAAGTGCAATGTCGATTCCTTTTGAATATTGTAGTCAGAAAGAGTACGACC 3222 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | ||||| |||||| | || || | ||||||||| || ||||| |||||||| Sbjct 3223 ATCTTCCAACTGTTTTCCAGCAAAAATTAAACGTTGCTGATCTGGTGGAATTCCCTCTTT 3282 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | ||| ||| |||| | || |||||| |||| || ||||| || | Sbjct 3283 GTCCTG-AATCTTGGCTTTAACATTTTCAATGGTATCAGAAGGTTCGACCTCAAGTGTGA 3341 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 | || || || |||| |||||||||||||||||||||| Sbjct 3342 TGGTCTTACCCGTTAGGGTTTTAACAAATATCTGCATT 3379 >seq188148 Length=18106 Score = 140 bits (154), Expect = 2e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || |||||||| | |||||||| ||||| ||||| || || | | ||| ||| | Sbjct 3625 CGGAGTACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTACGACCA 3684 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | |||||| || || | ||||| | ||| ||||| || || ||||| |||||| Sbjct 3685 TCTTCCAATTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGGGGGATACCTTCTTTG 3744 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | ||| |||||| |||| | ||||| ||| | || ||||| | || || Sbjct 3745 TCTTGGATTTTAGCCTTGACATTTTCAATGGTGTCGGAAGGCTCGACTTCCAAGGTAATG 3804 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| |||||||| ||||| || || |||||||| Sbjct 3805 GTTTTACCAGTTAAAGTTTTGACGAAGATCTGCAT 3839 >seq185055 Length=12631 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||| ||||||||||| || || ||||| ||||| ||||| || || | Sbjct 12426 CCTCCGCGAAGACGTAGCACCAAATGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 12485 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || | |||||||||||| | ||||| | ||| ||||| || ||| Sbjct 12486 AGAGTACGGCCATCCTCTAATTGTTTGCCAGCGAAGATCAAACGTTGTTGATCTGGGGGA 12545 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||| ||||| | || || ||| |||| | || || || |||| ||| Sbjct 12546 ATGCCTTCTTTATCTTGGATCTTAGCCTTAACATTTTCAATGGTATCGGATGGTTCGACT 12605 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAA 29765 || | ||| ||||||||||| || || Sbjct 12606 TCCAAAGTGATAGTTTTGCCGGTCAA 12631 >seq22680 Length=2395 Score = 102 bits (112), Expect = 6e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| |||| | || |||| ||| | ||| ||| ||||| ||||| || || | Sbjct 775 CCTCCTCTCAGTCTTAGTACCAGATGTAAGGTGCTTTCCTTTTGGATGTTGTAGTCGTTA 834 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | ||| ||||| ||||| || || ||||||||||||| || || || || Sbjct 835 AGGGTCCTTCCATCCTCGAGCTGTTTACCTGCGAATATCAATCTTTGTTGGTCTGGAGGG 894 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||||||||| | ||| ||| || |||| | ||||| | ||| || Sbjct 895 ATTCCTTCTTTGTCTTGGATCTTTGCTTTTACGTTTTCGATCGTGTCTGTGCTTTCGACC 954 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTT 29788 || | | ||| || || || |||| ||||| ||||| || ||||||| Sbjct 955 TCCAAGGCTATTGTCTTTCCTGTTAGTGTTTTGACAAAGATTTGCATTT 1003 >seq189465 Length=36930 Score = 87.8 bits (96), Expect = 1e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 88949 GGTTTGCATGGTTTTCATGTGCACGAATATGGCGACACGAGTAACGGATGCACGTCGGCG 89008 || || |||||||| ||||| ||||||| ||| |||| | || || ||||| || || Sbjct 21668 GGCTTACATGGTTTCCATGTTCACGAATTTGGTGACAATACAAATGGCTGCACTTCAGCT 21727 Query 89009 GGCGAACATTTCAATCCCACGGGCATGGATCACGGCGCGCCCGACGCTTTAATGAAACAT 89068 ||| ||||||||||||| || | ||| || || || || | | || | |||| Sbjct 21728 GGCCCACATTTCAATCCCTGTGGTAAGGAACATGGTGCCCCTAGTGATGAAAACAGACAT 21787 Query 89069 GTTGGTGATTTGGGAAATGTTGAAGC 89094 || |||||||||||||| ||||||| Sbjct 21788 GTAGGTGATTTGGGAAACATTGAAGC 21813 >seq20636 Length=14080 Score = 86.0 bits (94), Expect = 5e-12 Identities = 140/197 (71%), Gaps = 5/197 (3%) Strand=Plus/Minus Query 89682 ATCCGCAATACGCGACAAAAACGGCTCGGTTGCGCACTTTTGAACGCAACTGGCCTTGCG 89741 |||| | || || | | |||||||||| ||||| || || || || |||||| | Sbjct 5570 ATCCCGACTATGCTATAGAAACGGCTCGTTTGCGTACCTTC--ACCGAA-TGGCCTAGAC 5514 Query 89742 CTTTGAAACAAAAACCTGAGCAGTTGGCGGATGCCGGttttttttACACGGGCCAAGGCG 89801 | ||||||||||||||| || ||||| || || ||||| ||||| || || ||| | Sbjct 5513 ATATGAAACAAAAACCTGCACAATTGGCCGAAGCTGGTTTCTTTTATACCGGTACAGGTG 5454 Query 89802 A-CAAGACGATTTGTTTCTTTTGCAACGGGGGCCTTAAGGATTGGGAAGATGGCGATGAA 89860 | | | | | |||||| |||| || || || ||||||||||| || ||||| Sbjct 5453 ATCGCGTC-AAATGTTTCAGTTGCGGTGGTGGTCTAAAGGATTGGGATGAAAATGATGAC 5395 Query 89861 CCTTGGGAACAACATGC 89877 || ||||||||||| || Sbjct 5394 CCCTGGGAACAACACGC 5378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384315627436860