Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq175891 87.8 2e-12 seq173136 84.2 2e-11 >seq175891 Length=10111 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||||| ||||| || ||||||||||| || ||| | ||| || | Sbjct 8523 AAATGCAATGTGGATTCTTTTTGAATATTGTAATCAGACAATGTGCGCCCGTCTTCCAAT 8464 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || ||||| || |||| | || || || || || ||||| ||||||||||| ||| Sbjct 8463 TGTTTGCCAGCAAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTGTC-TTGAAT 8405 Query 133575 TTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| || || | | |||| || |||| ||||| || || | |||| ||||||||| Sbjct 8404 TTTAGCTTTTACATTTTCAATAGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTGCC 8345 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || || || || ||||| Sbjct 8344 AGTCAATGTCTTGACAAAGATTTGCAT 8318 >seq173136 Length=30018 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 148821 GCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCG 148880 || || ||||| | ||| || ||||| | ||||| ||||| || ||||| || || Sbjct 2972 GCAATGGAGGCCAAATTACAAACGGCTATTTCATCGGGGGCAGAATATTCTACAATTTCT 2913 Query 148881 GCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCAC 148940 | ||||| ||||||||||| || ||| | || | || || ||||||| || || Sbjct 2912 GTACACAGGTTGCTGCATTTAATAGTGCCTATATTTTGCTGGTTACTCTTGCGATTACAG 2853 Query 148941 GCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTG 148981 || |||||||| | |||||| ||| |||||||| || || Sbjct 2852 GCATCCTTGTATAACATGTAGGGTGTACCAGTTTCTACTTG 2812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482257810410400