Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq175891 116 3e-21 seq188148 86.0 5e-12 seq21005 84.2 2e-11 >seq175891 Length=10111 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || |||||||||||||| ||||| || |||| || || | Sbjct 8318 ATGCAAATCTTTGTCAAGACATTGACTGGCAAAACCATCACTTTGGAGGTTGAGCCTTCC 8377 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | || ||| |||||| ||||| ||||| | ||| |||||| Sbjct 8378 GATACTATTGAAAATGTAAAAGCTAAAATTCAAGACAAGGAAGGAATCCCCCCAGATCAA 8437 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | |||| ||| ||||||||||| ||||| || || |||||||| Sbjct 8438 CAACGTTTGATTTTTGCTGGCAAACAATTGGAAGACGGGCGCACATTGTCTGATTACAAT 8497 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||||||||| ||| | ||||| ||||| | ||||| || || Sbjct 8498 ATTCAAAAAGAATCCACATTGCATTTGGTATTACGTTTACGTGGTGG 8544 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 ||||||||||| || || || || || |||||||||||||| ||| | || ||||| Sbjct 8087 AAAATGCAAATCTTCGTGAAGACCTTAACTGGCAAGACCATCACCTTAGAGGTCGAACCT 8146 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 ||| || ||| | || || |||||| || || || || | ||| ||| Sbjct 8147 TCTGATACTATTGAGAACGTCAAGGCTAAAATTCAAGATAAGGAGGGTATTCCCCCAGAT 8206 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 |||||| | | |||| ||| || |||||||| ||||| ||| || ||||||| Sbjct 8207 CAACAACGTTTGATTTTTGCCGGTAAACAATTGGAAGACGGACGCACTTTGTCCGATTAC 8266 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGT 106468 ||||| ||||||||||||||||| ||||| || Sbjct 8267 AACATTCAAAAAGAATCTACACTTCATTTGGT 8298 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||| |||||||| || || || || || ||||| | || ||||| Sbjct 8546 ATGCAAATTTTCGTTAAAACCTTAACGGGAAAAACAATTACACTAGAGGTTGAACCTTCG 8605 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || | | | || ||| ||||| ||||||||||| | ||| |||||| Sbjct 8606 GATACTATAGAAAACGTTAAAGCCAAAATCCAAGACAAAGAAGGTATTCCCCCAGATCAA 8665 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || | | || | || || |||||||| |||||| || || |||||||||| Sbjct 8666 CAGCGTTTAATCTTCGCTGGTAAACAATTGGAAGATGGACGTACATTGTCCGATTACAAC 8725 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || |||||||||||||| || || |||||||| Sbjct 8726 ATCCAAAAAGAATCTACCCTTCACTTAGTATT 8757 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||||||||| || || || || |||||||| || ||| | ||| || || Sbjct 8774 ATGCAAATTTTTGTAAAGACTTTAACCGGCAAGACTATCACCTTAGAAGTTGAGCCATCT 8833 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | || || ||||| ||||||||||| | ||| |||||| Sbjct 8834 GATACCATTGAAAACGTCAAGGCTAAAATCCAAGACAAAGAAGGTATTCCCCCAGATCAA 8893 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | ||| || |||||||| |||||| || || || |||||| Sbjct 8894 CAACGTTTAATCTTTGCTGGTAAACAATTGGAAGATGGCCGTACATTGTCGGACTACAAC 8953 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || |||||||||||||| || || |||||||| Sbjct 8954 ATCCAAAAAGAATCTACCCTTCACTTAGTATT 8985 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| || || || || ||||| ||||||||||||||| ||||| ||| || Sbjct 9230 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACCATTACCTTGGAAGTAGAGCCATCT 9289 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | || || |||||| || |||||||| | || ||||| Sbjct 9290 GATACCATTGAAAATGTCAAGGCTAAAATTCAAGATAAAGAAGGTATTCCTCCAGATCAG 9349 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | |||| || || || || || |||||| ||| || |||||| ||| Sbjct 9350 CAACGTTTGATTTTCGCCGGTAAGCAGTTGGAAGATGGACGTACTTTGTCCGATTATAAC 9409 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTG 106472 || ||||| |||||||| || || || || ||| Sbjct 9410 ATCCAAAAGGAATCTACCCTTCACTTGGTTTTG 9442 >seq188148 Length=18106 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || || || ||||| || ||||| || ||||||||| ||||| || || | Sbjct 3839 ATGCAGATCTTCGTCAAAACTTTAACTGGTAAAACCATTACCTTGGAAGTCGAGCCTTCC 3780 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | || || ||||| ||||||||||| | ||| |||||| Sbjct 3779 GACACCATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATCCCCCCAGATCAA 3720 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | | || | || || |||||||| |||||| | || || ||| |||||| Sbjct 3719 CAACGTTTGATCTTCGCCGGTAAACAATTGGAAGATGGTCGTACCTTGTCCGACTACAAC 3660 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTA 106469 || ||||| ||||| || ||||||| ||| Sbjct 3659 ATCCAAAAGGAATCCACTTTACATTTGGTA 3630 >seq21005 Length=2931 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 99884 AAATCTGCACGTTTAGAAACTTTTGTGGATTGGCCGCTCAGTTTGAAACAAAAACCAGAG 99943 ||| | | ||||||| | || |||| |||||||| | |||||||||||||| || || Sbjct 1249 AAAACGGAACGTTTAAACACATTTGCTGATTGGCCTCGAAGTTTGAAACAAAAGCCTGAA 1190 Query 99944 CAATTGGCCGAAGCCGGTTTTTATTACACCGGCAAAGGTGACAAAGTTAAATGTTTTCAT 100003 ||| | || || ||||| || | ||| | |||| || || |||| ||||||| | Sbjct 1189 CAACTAGCTGAGGCCGGGTTCTTTTATAGGGGCACTGGGGATGCTGTTATATGTTTTAGT 1130 Query 100004 TGCGACGGCGGCCTCAAAGACTGGGA 100029 || || ||||||||||| ||||| Sbjct 1129 TGTTTGGGTGGCCTCAAAGATTGGGA 1104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 401385893175680