Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq188148 136 4e-27 seq175891 125 7e-24 seq5262 120 3e-22 seq173136 118 1e-21 seq22680 104 2e-17 seq185055 87.8 2e-12 >seq188148 Length=18106 Score = 136 bits (150), Expect = 4e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 |||| |||||||||||||| |||||||||||| | ||| || || || | ||| Sbjct 3637 TGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTACGACCATCTTCCAATTGT 3696 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || || || |||||||| || ||||| || || || |||||||| ||||| ||||| Sbjct 3697 TTACCGGCGAAGATCAAACGTTGTTGATCTGGGGGGATACCTTCTTTGTCTTGGATTTTA 3756 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||||| || | |||||||| | || || || | |||||||||||||| ||| Sbjct 3757 GCCTTGACATTTTCAATGGTGTCGGAAGGCTCGACTTCCAAGGTAATGGTTTTACCAGTT 3816 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 |||||||| ||||| || ||||| Sbjct 3817 AAAGTTTTGACGAAGATCTGCAT 3839 >seq175891 Length=10111 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||| || || || | ||| || || ||||| ||||| |||||||| ||| Sbjct 8772 CCTCCACGGAGACGTAATACTAAGTGAAGGGTAGATTCTTTTTGGATGTTGTAATCGGAC 8713 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || || | ||||| || || || || |||||||| ||||| || || Sbjct 8712 AATGTACGTCCATCTTCCAATTGTTTACCAGCGAAGATTAAACGCTGTTGATCTGGGGGA 8653 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| ||||| ||||| ||| || || | || || || | ||| || Sbjct 8652 ATACCTTCTTTGTCTTGGATTTTGGCTTTAACGTTTTCTATAGTATCCGAAGGTTCAACC 8593 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| ||||| || ||||| |||||||||||||||||||| Sbjct 8592 TCTAGTGTAATTGTTTTTCCCGTTAAGGTTTTAACGAAAATTTGCAT 8546 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| ||||| || | ||| || || || |||||||| ||||| || ||| Sbjct 9684 CCACCACGGAGACGCAAAACCAAGTGAAGGGTAGACTCCTTTTGGATGTTATAATCGGAC 9625 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || | ||||| || || ||||||||||| || ||||| || || Sbjct 9624 AAAGTGCGTCCGTCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 9565 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| ||||| |||||| ||||| || | || ||||| | || || Sbjct 9564 ATACCTTCTTTATCTTGGATTTTTGCCTTGACATTTTCAATGGTATCGGATGGCTCAACT 9505 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| || || || ||||| || ||||| ||||| |||||||| Sbjct 9504 TCCAAAGTGATAGTCTTGCCGGTCAAGGTTTTGACGAAGATTTGCAT 9458 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575 |||||||| |||||||| ||||| || | ||| | || | ||| || | |||||||| Sbjct 8514 GTGGATTCTTTTTGAATATTGTAATCAGACAATG-TGCGCCCGTCTTCCAATTGTTTGCC 8456 Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635 |||||||||||||| || ||||| || || || ||||| || ||||||||||| ||| Sbjct 8455 AGCAAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTGTCTTGAATTTTAGCTTT 8396 Query 134636 GACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGT 134695 || || | || ||||| | || || || | ||| |||||||| || || || || Sbjct 8395 TACATTTTCAATAGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTGCCAGTCAATGT 8336 Query 134696 TTTAACGAAAATTTGCAT 134713 || || || |||||||| Sbjct 8335 CTTGACAAAGATTTGCAT 8318 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| ||||| || | ||| || || ||||||||||| ||||| || ||| Sbjct 9456 CCACCACGGAGACGCAAAACCAAGTGAAGGGTAGATTCCTTTTGGATGTTATAATCGGAC 9397 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || || | ||| || || || ||||||||||| |||||||| || || Sbjct 9396 AAAGTACGTCCATCTTCCAACTGCTTACCGGCGAAAATCAAACGTTGCTGATCTGGAGGA 9337 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| ||||||||||| ||||| || | || || || | || || Sbjct 9336 ATACCTTCTTTATCTTGAATTTTAGCCTTGACATTTTCAATGGTATCAGATGGCTCTACT 9277 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | |||||||| || ||||| || || || ||||| |||||||| Sbjct 9276 TCCAAGGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 9230 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || ||||| |||||||||||||| ||| | ||| | ||| || | ||| Sbjct 8292 TGAAGTGTAGATTCTTTTTGAATGTTGTAATCGGACAAAGTGCGTCCGTCTTCCAATTGT 8233 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || |||||||||||||| || ||||| || || || || || || ||||||||||| Sbjct 8232 TTACCGGCAAAAATCAAACGTTGTTGATCTGGGGGAATACCCTCCTTATCTTGAATTTTA 8173 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||||| || | || || || | ||| || || | || ||||| || || ||| Sbjct 8172 GCCTTGACGTTCTCAATAGTATCAGAAGGTTCGACCTCTAAGGTGATGGTCTTGCCAGTT 8113 Query 134691 AAAGTTTTAACGAAAATTTGCATTTT 134716 || || || ||||| ||||||||||| Sbjct 8112 AAGGTCTTCACGAAGATTTGCATTTT 8087 Score = 105 bits (116), Expect = 7e-18 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || || | ||| || || || | ||| || || ||||| ||||| ||||||||||| | | Sbjct 9000 CCACCACGGAGACGTAATACTAAGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGAC 8941 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | || || | ||||| || ||||| || ||||| || ||||| || || Sbjct 8940 AATGTACGGCCA-TCTTCCAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGGGG 8882 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATTCCA 134664 || |||||||| ||||| ||||| ||||| | | ||||| | || || | || | Sbjct 8881 AATACCTTCTTTGTCTTGGATTTTAGCCTTGAC-GTTTTCAATGGTATCAGATGGCTCAA 8823 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || | || || || || ||||||||||| || || ||||||||||| Sbjct 8822 CTTCTAAGGTGATAGTCTTGCCGGTTAAAGTCTTTACAAAAATTTGCAT 8774 >seq5262 Length=11329 Score = 120 bits (132), Expect = 3e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || ||||| || | ||| | || |||||||||||||| |||||||| || || || Sbjct 3161 AGACGCAAAACCAAGTGCAATGTCGATTCCTTTTGAATATTGTAGTCAGAAAGAGTACGA 3220 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | |||||| || |||||||| ||||| |||||||| || || || || ||| Sbjct 3221 CCATCTTCCAACTGTTTTCCAGCAAAAATTAAACGTTGCTGATCTGGTGGAATTCCCTCT 3280 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || ||| || || | || || || | ||| || || || || Sbjct 3281 TTGTCCTGAATCTTGGCTTTAACATTTTCAATGGTATCAGAAGGTTCGACCTCAAGTGTG 3340 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 ||||| ||||| |||| |||||||| || || |||||| Sbjct 3341 ATGGTCTTACCCGTTAGGGTTTTAACAAATATCTGCATT 3379 >seq173136 Length=30018 Score = 118 bits (130), Expect = 1e-21 Identities = 684/1079 (63%), Gaps = 33/1079 (3%) Strand=Plus/Plus Query 8254 GAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGC 8313 ||||| |||| || |||||| | ||||| || || || || ||| || || || Sbjct 2818 GAAACTGGTACACCCTACATGTTATACAAGGATGCCTGTAATCGCAAGAGTAACCAGCAA 2877 Query 8314 AACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCC 8373 || | ||||| ||| |||||||| ||||| | ||||||||| | || || ||| Sbjct 2878 AATATAGGCACTATTAAATGCAGCAACCTGTGTACAGAAATTGTAGAATATTCTGCCCCC 2937 Query 8374 GACGAAGTGGCCGTTTGCAATCTAGCGTCGGT-GTGTTTAAACGCGTTCGTTGATCGACG 8432 || ||| | |||||||| ||| | || || | | | |||| ||| ||| | Sbjct 2938 GATGAAATAGCCGTTTGTAATTTGGCCTCCATTGCGCTTAATAT-GTTTGTTACAC---- 2992 Query 8433 CTCA-AACACTTACGACTTTGAACAATTGAAAAACGCCGTGCAAGTGACGGTAC--GCAA 8489 || | || || | ||||||| | |||||||||| | |||| | ||| | || Sbjct 2993 CTGAGAAAACATTCGACTTTAAGAAATTGAAAAATGTTACTAAAGTTAT--TACCAGGAA 3050 Query 8490 TTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGGAAGAAGCGCGCGTATCGAACAT 8549 |||| || || || || | |||| ||||||| || ||| || ||| || | Sbjct 3051 TTTAAATAAAATTATAGACATAAATTATTATCCCCTGCCAGAGGCAAAGAAATCTAATCT 3110 Query 8550 GCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTGCCATGTT--- 8606 ||| || | ||| |||| | || || || ||| | || || | |||| || || Sbjct 3111 GCGTCATCGCCCCATTGGTATAGGTGTCCAGGGTTTTGCTGATAC-TTTG--ATTTTAAT 3167 Query 8607 GCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGGAAACGGT 8666 |||| ||||||| || || || | || | | ||| | ||||| ||||| | Sbjct 3168 GCGCTTCCCCTATGAGAGTGAACAGGCCTTTTTATTGAACCAACAAATATTTGAAACCAT 3227 Query 8667 GTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAGAATTGGGCACGTACGAATC 8726 ||||| || || ||||| ||||| ||| || | || | ||| || || || ||| | Sbjct 3228 TTATTATGGTGCCTTAGAGGCCAGTTGTGAATTGGCAGAAAAATATGGTACATATGAAAC 3287 Query 8727 GTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAATGTCACGCC 8786 || | ||| | || | ||| |||||| | ||||| || ||||||||| || || Sbjct 3288 CTATCCCGGCTGTCCAGTTAGCAAAGGAATACTACAATATGATATGTGGAATAAAACACC 3347 Query 8787 CACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTCAATTCGGTTTGCGCAA 8846 || |||||| ||||| | || ||| ||||| ||| ||| | || || Sbjct 3348 TACTGACTTGTGGGATTGGTCGGCATTAAAAGAAAAAATCAAGCAACATGGTGTACGTAA 3407 Query 8847 TTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGGGAAACAACGA 8906 || || | | ||| |||||| || || | || ||||| || |||| || || || Sbjct 3408 CTCTTTGCTTATTGCTCCCATGCCTACAGCATCTACCGCTCAGATTTTGGGCAATAATGA 3467 Query 8907 ATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGTGTTGGCCGGCGATTTTTT 8966 ||| ||||| || | || ||| | || |||| ||| | | || || || Sbjct 3468 ATCATTTGAACCTTATACTTCTAACATATATACCCGACGTGTGCTATCAGGAGAATTC-- 3525 Query 8967 AATGCTG--AATCGTCATTTGATGCGCGACTTGATCGAAGCGGGCGTTTACGACGACAAA 9024 |||| || |||| |||||| || || || | ||| | | | || || || Sbjct 3526 AATGTTGTTAATCATCATTTATTGAAAGATTTAACAGAACTTGATTTGTGGGATGATAAT 3585 Query 9025 ATGCGCGATGCCATCGTGGAAGCCAACGGCAGCGTTC-AGAA--CATTGACGCGGTGCCT 9081 ||| || || | | |||| || | | | || ||| || | | || Sbjct 3586 ATGAAAAATAAAATTAT---ATCCAATCGCGGATCTATACAAGCCATAGAAGAAATTCCC 3642 Query 9082 CAACACATTAAAGAGCTGTATAAAACCGTTTGGGAAATGAAG--CAA-AGCACGCTGATC 9138 || | ||| || || ||||| || ||||||||||| ||| ||||| | | Sbjct 3643 AAAAATATTCGTGACCTTTATAAGACAGTTTGGGAAATTTCCGTCAAGAGCACAATTAAA 3702 Query 9139 GGCATGGCTGCGGATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTAACGTGTTCGTA 9198 ||||| || ||| | |||||||| || ||||| |||||||| |||||| | |||| Sbjct 3703 ---ATGGCCGCCGATCGTGGCGCTTTCATAGATCAAAGTCAATCCTTTAACATACACGTA 3759 Query 9199 GCCGCACCAACTTACGCTTTGATGTCCAGCATTCATTATTTAACTTGGAAAATGGGTTTA 9258 || | ||| | ||||| | | || || |||| | ||||||| || ||| Sbjct 3760 GCTGAACCTAATTACGGTAAATTAACCTCTATACATTTCTATTCTTGGAAGGCTGGCTTA 3819 Query 9259 AAAACAGGCATGTACTATTTGCGCACAAAACCCGCCGCTGAACCTATCAAATTTACAGT 9317 || || |||||||||||||| | |||||||| ||||| | |||| ||||||| || Sbjct 3820 AAGACCGGCATGTACTATTTAAGAACAAAACCAGCCGCCAATGCTATACAATTTACTGT 3878 >seq22680 Length=2395 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 || |||||||| |||| | || || |||| ||| ||||||||| |||||||||||| Sbjct 772 TTACCTCCTCTCAGTCTTAGTACCAGATGTAAGGTGCTTTCCTTTTGGATGTTGTAGTCG 831 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 || ||| || ||||||||||| ||||| || ||||| | || || || || Sbjct 832 TTAAGGGTCCTTCCATCCTCGAGCTGTTTACCTGCGAATATCAATCTTTGTTGGTCTGGA 891 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || |||||||| ||||| || ||| ||| || || | ||||| | ||| Sbjct 892 GGGATTCCTTCTTTGTCTTGGATCTTTGCTTTTACGTTTTCGATCGTGTCTGTGCTTTCG 951 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTT 134715 || || | | || || || || |||| ||||| || || |||||||||| Sbjct 952 ACCTCCAAGGCTATTGTCTTTCCTGTTAGTGTTTTGACAAAGATTTGCATTT 1003 >seq185055 Length=12631 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || || | ||| | || || || ||||||||||| ||||||||||| Sbjct 12426 CCTCCGCGAAGACGTAGCACCAAATGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 12485 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || || | |||||||| || || |||||||| || ||||| || || Sbjct 12486 AGAGTACGGCCATCCTCTAATTGTTTGCCAGCGAAGATCAAACGTTGTTGATCTGGGGGA 12545 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||||||||| ||||| || || || || || | || ||||| | ||| || Sbjct 12546 ATGCCTTCTTTATCTTGGATCTTAGCCTTAACATTTTCAATGGTATCGGATGGTTCGACT 12605 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAA 134692 || | ||| || ||||| ||||| || Sbjct 12606 TCCAAAGTGATAGTTTTGCCGGTCAA 12631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504182537799200