Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq191290 84.2 2e-11 >seq191290 Length=35329 Score = 84.2 bits (92), Expect = 2e-11 Identities = 170/250 (68%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 31155 TTCGATGTGATTGACATAAATATGCGCATCGCCAATAGAGTGTACCAATTCCCCTGGTCT 31214 ||| || ||||| ||||| ||| | ||| ||| | | || | || || |||||||| Sbjct 7268 TTCAATATGATTCTTATAAACATGTGTATCACCAGTGGTATGAATAAAATCTCCTGGTCT 7209 Query 31215 TAGATGGGTCAATTTGGCAATCACATGAACCAAAAGCGCATAACTCGCTATGTTGAATGG 31274 || | || | | ||||||| || | | |||||| ||||| || ||||| Sbjct 7208 CAGGTCAGTTATATGAGCAATCATATAGGTTAGTAAAGCATAAGAAGCTATATTAAATGG 7149 Query 31275 TACACCCAATCCCAAATCGGCAGATCGTTGATATAACAAACAGGAAAGTTCATCTCCGGT 31334 |||||| | |||| ||| ||| |||||||||| | ||| || | |||| | | Sbjct 7148 TACACCAAGACCCATATCAGCACTACGTTGATATAGCTGACAAGATAATTCACCATTAGC 7089 Query 31335 CACGTAAAATTGAAATAACACA-TGACAAGGCGGCAAAGCCATTTCACAGGTATCGACGG 31393 || || ||||| || ||| |||||||| ||||||||||||| |||| || | Sbjct 7088 AACATAGAATTGTGCCAA-ACAGTGACAAGGTGGCAAAGCCATTTGTGGTATATCAACAG 7030 Query 31394 GATTCCAAGC 31403 |||||||||| Sbjct 7029 GATTCCAAGC 7020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511783407908800