Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq191290 96.9 3e-15 >seq191290 Length=35329 Score = 96.9 bits (106), Expect = 3e-15 Identities = 185/269 (69%), Gaps = 4/269 (1%) Strand=Plus/Minus Query 111669 TTTTGGAAAGGGGGTAGGCTTTCGGGTAAGCTGTAATTGTAAAGGCTGTATGTGATTTAA 111728 ||| ||||||||| || || || | ||||| | |||||| | || ||||| Sbjct 7313 TTTAGGAAAGGGGCGTGGTTTCCGTTTTAGCTGCTCCTTTAAAGGTTCAATATGATTCTT 7254 Query 111729 ATAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTG 111788 ||||||||| | ||| || | ||| || || || | || || |||| || || Sbjct 7253 ATAAACATGTGTATCACCAGTGGTATGAATAAAATCTCCTGGTCTCAGGTCAGTTATATG 7194 Query 111789 TGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCCAT 111848 |||||||| || || |||| | ||| ||| || |||||||| ||||| || ||||| Sbjct 7193 AGCAATCATATAGGTTAGTAAAGCATAAGAAGCTATATTAAATGGTACACCAAGACCCAT 7134 Query 111849 ATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTG-AC 111907 ||| | | ||||||||||||||| |||| || | | | ||||| ||||| | Sbjct 7133 ATCAGCACTACGTTGATATAGCTGACAAGATAATTCACCATTAGCAACATAGAATTGTGC 7074 Query 111908 AAAGTACA-TGACAAGGAGGCAATGCCAT 111935 || ||| |||||||| ||||| ||||| Sbjct 7073 CAA--ACAGTGACAAGGTGGCAAAGCCAT 7047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391026249950980