Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_028699.1 Length=40740 Score E Sequences producing significant alignments: (Bits) Value seq120521 91.5 4e-14 >seq120521 Length=510 Score = 91.5 bits (100), Expect = 4e-14 Identities = 212/315 (67%), Gaps = 6/315 (2%) Strand=Plus/Plus Query 34703 TGTAAAGCATCTTTAGGACGAATTTCTTGATAGCCTGTCGCCTCATCAACTAGGGCGATA 34762 |||||||| ||||| | |||||||| ||||| || | ||||||| || || || Sbjct 81 TGTAAAGCGTCTTTTTCTCTTATTTCTTGGTAGCCAGTAACTTCATCAATTAAAGCCGTA 140 Query 34763 ATACCAACTTTTGCAAGTGAACGGACTAAGATTTCTGCTTTTTGAGCTGTATCCATCTGG 34822 ||| | |||||||| ||||| | || | ||||||||||||| ||||| || | || Sbjct 141 ATAGCTACTTTTGCTAGTGACCTAACAAGTATTTCTGCTTTTTTTGCTGTGTCAAATTGA 200 Query 34823 TTTGCTTTTAGCGCACCATCCTGTCTGGCTTTTAAATAAGCATCGCATACCAGAGGAAGT 34882 ||| | ||| | | || ||| ||||||||||| ||| | |||| ||| | | Sbjct 201 CTTGTTGTTAATAAATTTTTCTCTCTAGCTTTTAAATATAAATCAGAAACCAAAGGTAAT 260 Query 34883 ATTGAAGCATCATACCCCTCAAGCTCAGATCCTGAATTGTCTAAATA-TCGCTCTCGTTT 34941 || |||||||| || | ||| | | || |||||||| || || | || Sbjct 261 ATATTTGCATCATAACCTTGTTGCTTTCTACTTTCTTTATCTAAATATTCTACCTTG-TT 319 Query 34942 GATCACCCCCATAAGTTCTTGATTAATATAAGGAAT--AAGGTTAGCGGCATCCATAAAC 34999 |||||| |||| | || | || ||||||| | |||||| ||||||||||| Sbjct 320 GATCACAGCCATTAAGTCATCAT--CTATAAGGGGTTGAAGGTTCTTAGCATCCATAAAA 377 Query 35000 GCAGGTAGTATGATC 35014 |||||| ||||| Sbjct 378 ACAGGTACATTGATC 392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129948726737040