Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_028898.1 Length=35764 Score E Sequences producing significant alignments: (Bits) Value seq62959 93.3 1e-14 >seq62959 Length=655 Score = 93.3 bits (102), Expect = 1e-14 Identities = 226/340 (66%), Gaps = 7/340 (2%) Strand=Plus/Minus Query 24615 TAAATTTTCTTCCTAAATGCCACTTGGTAAAATTCTTGTAAGATTGTTTTATGGAACCGT 24674 || |||||||| ||||| || || ||||| || | | || ||| | ||||| | Sbjct 344 TATATTTTCTTTCTAAAAGCGACAGCATAAAACTCATCTTGTATCGTTCTGTGGAATCTC 285 Query 24675 TCGCAGATGCCGTTAGTCTGCGGATGTTTTACCTTGGTTTTACTGTGTTCAATATCATTT 24734 || |||||||| || || || || || | || || || |||| || ||||| | Sbjct 284 TCACAGATGCCATTTGTTTGAGGGCTCTTAGCTTTAGTCTTGGTGTGGTCTATATCTTCA 225 Query 24735 ATTGCTAAA---TAAAGCTCATAATCGTGAT--TTTCTACCTTGCCACAATATTCACTTC 24789 || || | | || || | ||| || |||| | ||| || || ||||| ||| ||| Sbjct 224 ATAGCAACAAGATATAGTTGATATTCATGATGCTCTCTGACT--CCGCAATACTCAGTTC 167 Query 24790 CTCGGTCAGTTAATATGCGTAACATCGGTAAACCTTGGCTTTCAAAGTATGGTAACACTT 24849 ||| || || || | |||||| | ||| | || |||||| | || | |||| Sbjct 166 CTCTATCGGTCAACACGCGTAATAATCTTAATTCATGCTCGTCAAAGAAGGGCACAACTT 107 Query 24850 TATCATTCAGCATATCCGCAGCACTGATAGCGGTCTTCATTGTATAAAGTTTTGCAAACG 24909 |||||| | |||||| ||||| | | ||| |||| | ||| || || ||||| | Sbjct 106 GATCATTTAACATATCAGCAGCCATCAGAGCTTTCTTTCTATCATACAGCTTGGCAAATG 47 Query 24910 CCACTTTACTGTAAGTATCAATAAACGTTTGTTGATAAAT 24949 |||| || || ||||||||||| ||||| | ||||| Sbjct 46 CCACCTTTGAATAGGTATCAATAAAGGTTTGCAGGTAAAT 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114061918613520