Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq191290 102 7e-17 >seq191290 Length=35329 Score = 102 bits (112), Expect = 7e-17 Identities = 197/291 (68%), Gaps = 0/291 (0%) Strand=Plus/Minus Query 118374 AAAATCTTCAAACTTAAAGTCTTCTATATTTTTGATATCCTTGTTTATGGATAGTGTGGG 118433 |||||||||||| || || || ||||||| || || | | ||||| | | | || Sbjct 7367 AAAATCTTCAAATTTGAAATCATCTATATCTTCGACTTTTCTCTTTATAACCAATTTAGG 7308 Query 118434 AAACGGGAGAGGCTCCCTTGTGAGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGAC 118493 ||| ||| | || | || | | || || || | || ||||| |||||| |||| || Sbjct 7307 AAAGGGGCGTGGTTTCCGTTTTAGCTGCTCCTTTAAAGGTTCAATATGATTCTTATAAAC 7248 Query 118494 ATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAGCCCTGTCAGGTGAGCAAT 118553 ||| | ||| ||| | ||||| || || || || ||| | || | || | |||||||| Sbjct 7247 ATGTGTATCACCAGTGGTATGAATAAAATCTCCTGGTCTCAGGTCAGTTATATGAGCAAT 7188 Query 118554 CATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCCATGTCTGC 118613 ||| || || | ||| || |||| |||||| || ||||| |||||||| || || Sbjct 7187 CATATAGGTTAGTAAAGCATAAGAAGCTATATTAAATGGTACACCAAGACCCATATCAGC 7128 Query 118614 TGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 | || || | || ||||| | || || || |||||||| || || Sbjct 7127 ACTACGTTGATATAGCTGACAAGATAATTCACCATTAGCAACATAGAATTG 7077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 413504600627440