Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq22680 174 4e-38 seq175891 134 3e-26 seq137448 118 2e-21 seq188148 104 5e-17 seq185055 104 5e-17 >seq22680 Length=2395 Score = 174 bits (192), Expect = 4e-38 Identities = 175/226 (77%), Gaps = 1/226 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 |||||||| || || || | ||| || ||||||||||| || || |||||||||| Sbjct 784 AGTCTTAGTACCAGATGTAAGGTGCTTTCCTTTTGGATGTTGTAGTCGTTAAGGGTCCTT 843 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| || ||||| || |||||||| || | | ||||||||| ||||| | |||||| Sbjct 844 CCATCCTCGAGCTGTTTACCTGCGAATATCAATCTTTGTTGGTCTGGAGGGATTCCTTCT 903 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| ||||||||| ||| ||||||||||| ||||| | |||||| ||||| | | Sbjct 904 TTGTCTTGGATCTTTGCTTTTACGTTTTCGATCGTGTCTGTGCTTTCGACCTCCAAGGCT 963 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTT-TATGG 211121 || |||||||| || || || || ||||| | ||||||| ||||| Sbjct 964 ATTGTCTTTCCTGTTAGTGTTTTGACAAAGATTTGCATTTCTATGG 1009 >seq175891 Length=10111 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| || | || || | |||||| || || |||||||||||||| || |||| | || Sbjct 8995 ACGGAGACGTAATACTAAGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGACAATGT 8936 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||||| || || || || ||||| | |||||||| || || |||| || Sbjct 8935 ACGGCCATCTTCCAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGGGGAATACC 8876 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| ||||| ||||| || || |||||||| ||||| ||||| ||||| || | Sbjct 8875 TTCTTTGTCTTGGATTTTAGCCTTGACGTTTTCAATGGTATCAGATGGCTCAACTTCTAA 8816 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || || | |||||||||||| | ||||| Sbjct 8815 GGTGATAGTCTTGCCGGTTAAAGTCTTTACAAAAATTTGCAT 8774 Score = 131 bits (144), Expect = 4e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | || || | |||||| || || |||||||||||||| ||||| | | Sbjct 8770 TCCACGGAGACGTAATACTAAGTGAAGGGTAGATTCTTTTTGGATGTTGTAATCGGACAA 8711 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | ||||||||||| || || || |||||||| | || ||||| || || |||| Sbjct 8710 TGTACGTCCATCTTCCAATTGTTTACCAGCGAAGATTAAACGCTGTTGATCTGGGGGAAT 8651 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 ||||| ||||| ||||| || ||| |||||||| || || || || ||||||||| Sbjct 8650 ACCTTCTTTGTCTTGGATTTTGGCTTTAACGTTTTCTATAGTATCCGAAGGTTCAACCTC 8591 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || |||||||| | || || || || | ||||| Sbjct 8590 TAGTGTAATTGTTTTTCCCGTTAAGGTTTTAACGAAAATTTGCAT 8546 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | | || | |||||| || || || ||||||||||||||||| | | || Sbjct 9223 ACGAAGACGCAAAACCAAGTGAAGGGTAGATTCCTTTTGGATGTTATAATCAGACAATGT 9164 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||||||||| |||||| || ||||| || | ||||||||||| || |||| || Sbjct 9163 ACGTCCATCTTCCAACTGCTTACCGGCGAAAATCAAACGTTGTTGGTCTGGGGGAATACC 9104 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| |||||||| || || || || || || || ||||| || || || | Sbjct 9103 TTCCTTATCCTGGATTTTAGCCTTTACATTCTCTATAGTATCAGATGGCTCTACTTCCAA 9044 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || ||||| || | || || ||||| | ||||| Sbjct 9043 GGTGATAGTTTTTCCAGTCAAGGTTTTCACAAAGATTTGCAT 9002 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 |||||| || ||||| ||||||||||||||||| | | || | ||| ||||||| || Sbjct 9661 GTGAAGGGTAGACTCCTTTTGGATGTTATAATCGGACAAAGTGCGTCCGTCTTCCAATTG 9602 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || ||||| || | |||||||| || ||||||| ||||| || || ||||| || Sbjct 9601 TTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCTTTATCTTGGATTTT 9542 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 | || || ||||| ||||| || || ||||| || | |||||| ||||| || || Sbjct 9541 TGCCTTGACATTTTCAATGGTATCGGATGGCTCAACTTCCAAAGTGATAGTCTTGCCGGT 9482 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 | || || || || | ||||| Sbjct 9481 CAAGGTTTTGACGAAGATTTGCAT 9458 Score = 111 bits (122), Expect = 4e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 |||||| || || || ||||||||||||||||| | | || | ||||||||||| ||| Sbjct 9433 GTGAAGGGTAGATTCCTTTTGGATGTTATAATCGGACAAAGTACGTCCATCTTCCAACTG 9374 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || ||||| || | ||||| || || ||||||| ||||| || || || || || Sbjct 9373 CTTACCGGCGAAAATCAAACGTTGCTGATCTGGAGGAATACCTTCTTTATCTTGAATTTT 9314 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || || ||||| ||||| ||||| || || || | || || ||||| || || Sbjct 9313 AGCCTTGACATTTTCAATGGTATCAGATGGCTCTACTTCCAAGGTAATGGTCTTGCCGGT 9254 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 | ||||| || || | ||||| Sbjct 9253 CAAGGTCTTGACGAAGATTTGCAT 9230 Score = 104 bits (114), Expect = 5e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 ||||| |||||||| || || ||||| | | || | || ||||||| || ||||| Sbjct 8514 GTGGATTCTTTTTGAATATTGTAATCAGACAATGTGCGCCCGTCTTCCAATTGTTTGCCA 8455 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || || || | |||||||| || || || | |||||||||||| || || || ||| Sbjct 8454 GCAAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTGTCTTGAATTTTAGCTTTT 8395 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || ||||| || || || || |||||||| | |||||| || || || || | ||| Sbjct 8394 ACATTTTCAATAGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTGCCAGTCAATGTC 8335 Query 211098 TTTACAAACACCTGCAT 211114 || ||||| | ||||| Sbjct 8334 TTGACAAAGATTTGCAT 8318 >seq137448 Length=735 Score = 118 bits (130), Expect = 2e-21 Identities = 158/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| | ||||| || | ||| ||| || || || ||||| || | |||||| Sbjct 38 AGTCTCAACACAAGATGTAAAGTACTCTCCTTCTGTATATTATAGTCATTTAATGTCCTT 97 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| || |||||||| ||||| || || | | ||| ||||||||||| | ||||| Sbjct 98 CCATCCTCAAGCTGCTTCCCTGCAAATATCAATCTTTGCTGGTCAGGAGGTATCCCTTCT 157 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 |||||||| || || || || || || || || ||| | |||||| || | || Sbjct 158 TTGTCCTGTATTTTCGCCTTTACATTCTCAATTGTATCACCCCCTTCAACTTCCAATGTA 217 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTT 211116 || |||||||||||||| || || ||||| | ||||||| Sbjct 218 ATTGTCTTTCCCGTGAGTGTTTTGACAAAGATTTGCATTT 257 >seq188148 Length=18106 Score = 104 bits (114), Expect = 5e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | || | |||||| || ||||||||||| || || | | ||| Sbjct 3618 ACGAAGGCGGAGTACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGT 3677 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||||| || || || |||||||| | |||||||| || || || | || Sbjct 3678 ACGACCATCTTCCAATTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGGGGGATACC 3737 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| ||||| ||||| || || || ||||| |||||||| || || || || | Sbjct 3738 TTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTGTCGGAAGGCTCGACTTCCAA 3797 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || || | ||| || || || | |||||| Sbjct 3798 GGTAATGGTTTTACCAGTTAAAGTTTTGACGAAGATCTGCAT 3839 >seq185055 Length=12631 Score = 104 bits (114), Expect = 5e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||| || | || ||||| || || ||||||||||| || || | || || Sbjct 12432 CGAAGACGTAGCACCAAATGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAGAGTA 12491 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| || | || ||||| |||||||| | |||||||| || || |||| ||| Sbjct 12492 CGGCCATCCTCTAATTGTTTGCCAGCGAAGATCAAACGTTGTTGATCTGGGGGAATGCCT 12551 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || || || |||||||| || || ||||| ||||| || || ||| || || | | Sbjct 12552 TCTTTATCTTGGATCTTAGCCTTAACATTTTCAATGGTATCGGATGGTTCGACTTCCAAA 12611 Query 211074 GTGATCGTCTTTCCCGT 211090 ||||| || || || || Sbjct 12612 GTGATAGTTTTGCCGGT 12628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1156293654327900