Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq172957 152 1e-31 seq175891 143 6e-29 seq185055 136 9e-27 seq188148 134 3e-26 seq22680 125 2e-23 seq192360 95.1 3e-14 seq47705 84.2 5e-11 >seq172957 Length=35963 Score = 152 bits (168), Expect = 1e-31 Identities = 149/192 (78%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610 |||| |||| ||||| ||| | || || ||||| ||| |||| ||||||||| | ||||| Sbjct 17088 CCAAATTTATAACGTAATTGTAACAGCTCATGCTTTTATTATAATTTTCTTTATAGTTAT 17029 Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670 || |||| || || || || ||||||||||| ||||||||||| | || |||||||| Sbjct 17028 ACCAATTATAATTGGAGGATTTGGAAATTGATTAGTTCCTTTAATATTAGGGGCTCCTGA 16969 Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCT 7730 ||| ||||| ||| | | |||||||||||||||||| | |||| ||| | ||| ||| Sbjct 16968 TATAGCTTTCCCACGAATAAACAATATAAGTTTTTGACTTTTACCTCCTGCATTAACTCT 16909 Query 7731 AGGGTTGGTAAG 7742 | ||| || || Sbjct 16908 ATTGTTAGTTAG 16897 Score = 102 bits (112), Expect = 2e-16 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||| |||||||| ||||||||||| |||||||| | |||||||| ||||| |||| Sbjct 16515 TTCAGGGTGACCAAAGAATCAGAATAAGTGTTGATATAAAATAGGATCTCCTCCTCCTGC 16574 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 ||| ||||| || ||| || ||||||| ||||||||| Sbjct 16575 TGGGTCAAAGAATGAAGTGTTTAAATTTCGATCAGTTAA 16613 >seq175891 Length=10111 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| || || ||||||||||||| ||||| || | ||| || | |||||||| | || Sbjct 8977 GTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGACAATGTACGGCCATCTTCCAATTG 8918 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 || ||||| ||||| | |||||||| || || ||||||||||| ||||||||||| || Sbjct 8917 TTTACCAGCAAAGATTAAACGTTGTTGATCTGGGGGAATACCTTCTTTGTCTTGGATTTT 8858 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||| || ||| ||||| || || | || || ||||| ||||| |||||||| || Sbjct 8857 AGCCTTGACGTTTTCAATGGTATCAGATGGCTCAACTTCTAAGGTGATAGTCTTGCCGGT 8798 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| || | |||||| Sbjct 8797 TAAAGTCTTTACAAAAATTTGCAT 8774 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || || | ||| || || || || ||||||| || ||||||| |||||| Sbjct 9679 ACGGAGACGCAAAACCAAGTGAAGGGTAGACTCCTTTTGGATGTTATAATCGGACAAAGT 9620 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| | || || |||||||| || | |||||||| || || |||||||| Sbjct 9619 GCGTCCGTCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACC 9560 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| || |||||||| ||| ||| ||| ||| ||||| || || | || || || || Sbjct 9559 TTCTTTATCTTGGATTTTTGCCTTGACATTTTCAATGGTATCGGATGGCTCAACTTCCAA 9500 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| ||||| ||||| | ||| | |||||| Sbjct 9499 AGTGATAGTCTTGCCGGTCAAGGTTTTGACGAAGATTTGCAT 9458 Score = 138 bits (152), Expect = 3e-27 Identities = 155/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| || || ||||||||||||| |||||||||| ||| || | |||||||| | || Sbjct 8749 GTGAAGGGTAGATTCTTTTTGGATGTTGTAATCGGACAATGTACGTCCATCTTCCAATTG 8690 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 || ||||||||||| | || ||||| || || ||||||||||| ||||||||||| || Sbjct 8689 TTTACCAGCGAAGATTAAACGCTGTTGATCTGGGGGAATACCTTCTTTGTCTTGGAT-TT 8631 Query 225630 TTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCG 225688 | || || || ||| || || || || | ||| || |||| || || || || |||| Sbjct 8630 TGGCTTTAACGTTTTCTATAGTATCCGAAGGTTCAACCTCTAGTGTAATTGTTTTTCCCG 8571 Query 225689 TCAAAGTTTTTATGAACACTTGCAT 225713 | || ||||| | ||| | |||||| Sbjct 8570 TTAAGGTTTTAACGAAAATTTGCAT 8546 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || || | ||| || || ||||| ||||||| || ||||||| |||||| Sbjct 9451 ACGGAGACGCAAAACCAAGTGAAGGGTAGATTCCTTTTGGATGTTATAATCGGACAAAGT 9392 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | |||||| || ||||| || | ||||| || || || |||||||| Sbjct 9391 ACGTCCATCTTCCAACTGCTTACCGGCGAAAATCAAACGTTGCTGATCTGGAGGAATACC 9332 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| || ||||| || || ||| ||| ||| ||||| || || | || || || || Sbjct 9331 TTCTTTATCTTGAATTTTAGCCTTGACATTTTCAATGGTATCAGATGGCTCTACTTCCAA 9272 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||||||| ||||| || || | ||| | |||||| Sbjct 9271 GGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 9230 Score = 131 bits (144), Expect = 4e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| || || ||||| ||||||| || ||||| | ||| || Sbjct 9223 ACGAAGACGCAAAACCAAGTGAAGGGTAGATTCCTTTTGGATGTTATAATCAGACAATGT 9164 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | |||||| || ||||| || | ||||||||||| || |||||||| Sbjct 9163 ACGTCCATCTTCCAACTGCTTACCGGCGAAAATCAAACGTTGTTGGTCTGGGGGAATACC 9104 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || ||||| || ||| ||| || || || || || | || || || || Sbjct 9103 TTCCTTATCCTGGATTTTAGCCTTTACATTCTCTATAGTATCAGATGGCTCTACTTCCAA 9044 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || || ||||| ||||| | || | |||||| Sbjct 9043 GGTGATAGTTTTTCCAGTCAAGGTTTTCACAAAGATTTGCAT 9002 Score = 127 bits (140), Expect = 5e-24 Identities = 163/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | || || || ||||||||||| | |||||||||| |||||| Sbjct 8311 ACGAAGACGTAGAACCAAATGAAGTGTAGATTCTTTTTGAATGTTGTAATCGGACAAAGT 8252 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| | || || || || || || | |||||||| || || |||||||| Sbjct 8251 GCGTCCGTCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGTTGATCTGGGGGAATACC 8192 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| ||||| || || ||| || || || || || || | ||| || ||||| Sbjct 8191 CTCCTTATCTTGAATTTTAGCCTTGACGTTCTCAATAGTATCAGAAGGTTCGACCTCTAA 8132 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||||||| || || || || | ||| | ||||||||| Sbjct 8131 GGTGATGGTCTTGCCAGTTAAGGTCTTCACGAAGATTTGCATTTT 8087 Score = 120 bits (132), Expect = 7e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 |||||||||||||| | ||||||||| | ||| || | ||| ||||| | || || ||| Sbjct 8514 GTGGATTCTTTTTGAATATTGTAATCAGACAATGTGCGCCCGTCTTCCAATTGTTTGCCA 8455 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC-TT 225635 || || || | |||||||| || || || || |||||||||||||| || ||| || || Sbjct 8454 GCAAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTGTCTTGAAT-TTTAGCTTT 8396 Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695 ||| ||| || || || || | || || || || ||||| || ||||| ||||| || Sbjct 8395 TACATTTTCAATAGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTGCCAGTCAATGT 8336 Query 225696 TTTTATGAACACTTGCAT 225713 || | || | |||||| Sbjct 8335 CTTGACAAAGATTTGCAT 8318 Score = 89.7 bits (98), Expect = 1e-12 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 225592 TGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTG 225651 ||||| || || ||||||||||| ||||||||||| ||| ||| ||| ||| |||||| Sbjct 10111 TGTTGATCTGGAGGAATACCTTCTTTGTCTTGGATTTTTGCCTTGACATTTTCAATGGTG 10052 Query 225652 TCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGC 225711 || || | || || || || ||||| || || || ||||| || || | ||| | |||| Sbjct 10051 TCGGATGGCTCAACTTCCAAGGTGATGGTTTTACCTGTCAAGGTCTTGACGAAGATTTGC 9992 Query 225712 AT 225713 || Sbjct 9991 AT 9990 >seq185055 Length=12631 Score = 136 bits (150), Expect = 9e-27 Identities = 150/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | || || | |||||||| ||||| ||||||| ||||| || | || ||| Sbjct 12432 CGAAGACGTAGCACCAAATGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAGAGTA 12491 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| |||| || || ||||||||||| | |||||||| || || ||||| ||| Sbjct 12492 CGGCCATCCTCTAATTGTTTGCCAGCGAAGATCAAACGTTGTTGATCTGGGGGAATGCCT 12551 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 || || ||||||||||| ||| ||| ||| ||||| || || | ||| || || || Sbjct 12552 TCTTTATCTTGGATCTTAGCCTTAACATTTTCAATGGTATCGGATGGTTCGACTTCCAAA 12611 Query 225673 GTGATCGTCTTGCCCGTCAA 225692 ||||| || ||||| ||||| Sbjct 12612 GTGATAGTTTTGCCGGTCAA 12631 >seq188148 Length=18106 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | || | ||||||||| ||||||| ||||| |||| ||| || Sbjct 3618 ACGAAGGCGGAGTACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGT 3677 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | || || || |||||||| | |||||||| || || || ||||| Sbjct 3678 ACGACCATCTTCCAATTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGGGGGATACC 3737 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| ||||||||||| || ||| ||| ||| |||||||| || | || || || || Sbjct 3738 TTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTGTCGGAAGGCTCGACTTCCAA 3797 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || || || |||||||| | ||| | ||||| Sbjct 3798 GGTAATGGTTTTACCAGTTAAAGTTTTGACGAAGATCTGCAT 3839 >seq22680 Length=2395 Score = 125 bits (138), Expect = 2e-23 Identities = 164/226 (73%), Gaps = 1/226 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||| || || || || | ||| ||| ||||||| ||||| ||| | || || Sbjct 784 AGTCTTAGTACCAGATGTAAGGTGCTTTCCTTTTGGATGTTGTAGTCGTTAAGGGTCCTT 843 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || ||||| || || ||||| || | || ||||||||| || || || ||||| Sbjct 844 CCATCCTCGAGCTGTTTACCTGCGAATATCAATCTTTGTTGGTCTGGAGGGATTCCTTCT 903 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||||||||||||| || || |||||| ||||||| | |||| || || || | Sbjct 904 TTGTCTTGGATCTTTGCTTTTACGTTTTCGATCGTGTCTGTGCTTTCGACCTCCAAGGCT 963 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTT-TATGG 225720 || ||||| || || | ||||| | || | |||||||| ||||| Sbjct 964 ATTGTCTTTCCTGTTAGTGTTTTGACAAAGATTTGCATTTCTATGG 1009 >seq192360 Length=5402 Score = 95.1 bits (104), Expect = 3e-14 Identities = 98/127 (77%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795 ||||||| ||||| ||||| ||| ||||||||||||| ||||||||||| | | | Sbjct 1477 TGGTAAGGTTCTTCGCGTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 1418 Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGA-ATATTTACGC 7854 |||||| || |||||||||| | |||||| |||| | | |||| ||| | || || | Sbjct 1417 CCGTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGACAACTTAACAC 1358 Query 7855 GTTAGCT 7861 ||||||| Sbjct 1357 GTTAGCT 1351 >seq47705 Length=4283 Score = 84.2 bits (92), Expect = 5e-11 Identities = 96/128 (75%), Gaps = 1/128 (1%) Strand=Plus/Minus Query 7737 GGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTTC 7796 |||||| ||| | |||| ||| ||||||||||||| ||| |||||| | | | | Sbjct 1455 GGTAAGGTTCCTCGCGTATCATCGAATTAAACCACATGTTCCTCCGCTTGTGCGGGCCCC 1396 Query 7797 CGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTTA-CGCG 7855 ||||| || |||||||||| | | |||| | |||| | | |||||||| || ||| ||| Sbjct 1395 CGTCAATTCCTTTGAGTTTCACCGTTGCCGGCGTACTCCCCAGGTGGATTACTTATCGCT 1336 Query 7856 TTAGCTTA 7863 || ||||| Sbjct 1335 TTCGCTTA 1328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1189590544767240