Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phormia_20regina_20[genbank_20GCA_5F001735545.1_202016-09-19] 192,460 sequences; 549,932,840 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq172082 264 1e-65 >seq172082 Length=56793 Score = 264 bits (292), Expect = 1e-65 Identities = 480/694 (69%), Gaps = 14/694 (2%) Strand=Plus/Plus Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402 ||| || ||||| |||||||||| ||||||| | | | || ||||| || | ||||| Sbjct 14680 ATCGGCCACAAACTCAATATATTCCGACATCAATTTACAATTCATACCAATCAAATTTAC 14739 Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462 || | ||||| ||||||| | |||||| || || || ||| |||| | Sbjct 14740 GGGTAGAGCATCTGTTAAGAATTCCTGTTCAATTTTTACCGCCTCCGAAATGATTT---C 14796 Query 23463 AATAACTTCT-TCACTAGGTGGATATTTTA---AATACTTAAACAATAAACATGCAAAAT 23518 ||||| |||| || ||| ||| || || ||| ||||||| |||| ||||||| Sbjct 14797 AATAA-TTCTATCCCTACTAGGACGTTGTACCAAATGTTTAAACATTAAAACAGCAAAAT 14855 Query 23519 CACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTA 23578 ||||||||| || ||||| | ||||||||||| || ||||| | || ||||| | Sbjct 14856 CACAATGTAAACCCTCATCACGTGAGATCAATTCATTGGAGAATGTAAGGCCAGGCATAA 14915 Query 23579 ATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAA 23638 || ||||| || | ||||||||| | |||||| || |||||||||||||| | Sbjct 14916 GACCACGTTTCTTGAGCCAAAATATCGAAGCAAAACTACCACTGAAGAAAATACCCTCGA 14975 Query 23639 CAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGC--ATTATAATCAGAAATCCAttt 23696 |||| ||||| || | || ||| |||||| | || ||| || |||||||| Sbjct 14976 CAGCAGCAAATGCAATAATACGCTCACCAAAATTAGCCGATTTAGAT--GAAATCCAAGA 15033 Query 23697 ttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAA 23756 | | ||||| ||||| || ||| || |||||||| || || || ||| | Sbjct 15034 CATGGCCCAATCGGCCTTACGCTTAACAGCTGGCATAGTTTCAATAGCATTAAATAGATA 15093 Query 23757 AGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATG 23816 | || ||| ||| | || || || ||||||| | |||||||||||| || || Sbjct 15094 TTCTCGTTGATCACGATCCTTAATGTAAGTGTCAATTAAAATACTATACATTTCGGAGTG 15153 Query 23817 AATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATC 23876 | |||||| || ||||| || || ||||| ||||| | ||| || | | ||| || || Sbjct 15154 TACATTTTCCATGGCAATTTGGAAACCATAGAAACAACGAGCCTCTGTTACTTGCACCTC 15213 Query 23877 ATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGC 23936 | | || | || | | | |||||| ||||| |||||||| ||| |||||||| || Sbjct 15214 TTGGGAGAAACGTTCAACAAGATTTTCATTAACTATACCATCGGAAGCGGCAAAGAATGC 15273 Query 23937 AAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAA-TTTTTTCCAATCATTAATAT 23995 ||||| | | |||||||| | ||||| || | ||| | ||| ||| ||| | ||| Sbjct 15274 CAGAACGTGTGAAATAAAATGACGTTCAT-TGTCGGTAAGTCTTTCCCAGTCAGAATTAT 15332 Query 23996 CTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 | || || | ||||||||| ||||| |||||||| Sbjct 15333 CCTTGGAGAGATCAACTTCCTCAACGGTCCAAAA 15366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520233430244000