Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq4404 102 8e-17
>seq4404
Length=3800
Score = 102 bits (112), Expect = 8e-17
Identities = 184/269 (68%), Gaps = 0/269 (0%)
Strand=Plus/Minus
Query 16470 TTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCT 16529
||||||| || || || | | || |||||||| ||||| | || || ||||| || |
Sbjct 2401 TTATATAGGTGTCGATTAAAACGCTATACATTTCGGAGTGCACATTTTCCATGGCAATTT 2342
Query 16530 GAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCA 16589
| || ||||||||||| || ||||| | | ||| ||||| | || || || |||
Sbjct 2341 GGAAGCCATAGAAGCAACGTGCCTCAGTCACTTGAACTTCTTGGCTGAAACGCTCGACCA 2282
Query 16590 GGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAAT 16649
|| |||||||| || || || |||||||| || ||||| | |||| |||||||
Sbjct 2281 AATTTTCATTCACAATGCCATCGGAAGCAGCAAAGAAAGCCAACACGTGCGATATGAAAT 2222
Query 16650 ATTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTT 16709
|||| | ||||| || ||||||| | || || || || | ||| ||||| |
Sbjct 2221 GACGCTCGTTATCAGTAAGCTTAGCCCAATCTGTCAAGTCCTTCGACAGATCTACTTCCT 2162
Query 16710 CTGGCGTCCAAAAGCTAGCCACTGCCTTT 16738
| ||||| || ||| ||||||||
Sbjct 2161 CAACTGTCCAGAATGATGCCTCTGCCTTT 2133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511289915342360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |