Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq6120 96.9 4e-15
>seq6120
Length=7451
Score = 96.9 bits (106), Expect = 4e-15
Identities = 183/267 (69%), Gaps = 8/267 (3%)
Strand=Plus/Minus
Query 145680 CTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTC 145739
||||| || || | |||||| |||||| || || || || || ||| | ||||||
Sbjct 5032 CTTCAATGGTTCTATGTGGTTACTGTAGACATGAGCATCGCCAAGCGTGTGAACGAAGTC 4973
Query 145740 CCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTAT 145799
|| || | |||||||| | || || | |||||| || ||||| | || ||| ||
Sbjct 4972 TCCCGGTTTAAGGCCCGTCACATGAGCTATCATGTACGTAAGCAGTGCATACGAGGCGAT 4913
Query 145800 GTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTC 145859
||| |||||||| ||||| ||||| || | ||| || ||||||||||| || | |||
Sbjct 4912 GTTAAAGGGCACACCCAGACCCATATCTGCGCTGCGTTGATACAGCTGGCAAGACAACTC 4853
Query 145860 CCCGCCCGCC------ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGG 145912
|||| | | |||||||| || ||| || ||||| || |||| |||||
Sbjct 4852 ACCGCGTGTCGTTGATACGTAGAATTGAGCA-AGACAATGGCATGGTGGCAATGCCATCT 4794
Query 145913 CGGGCAGGTCCGCCGGGTTCCAGGCGG 145939
|| | ||| |||||||| ||||
Sbjct 4793 GCGGTATATCCAAAGGGTTCCAAGCGG 4767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589933167930920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |