Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28] 19,473 sequences; 155,550,413 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq6120 96.9 4e-15 >seq6120 Length=7451 Score = 96.9 bits (106), Expect = 4e-15 Identities = 183/267 (69%), Gaps = 8/267 (3%) Strand=Plus/Minus Query 145680 CTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTC 145739 ||||| || || | |||||| |||||| || || || || || ||| | |||||| Sbjct 5032 CTTCAATGGTTCTATGTGGTTACTGTAGACATGAGCATCGCCAAGCGTGTGAACGAAGTC 4973 Query 145740 CCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTAT 145799 || || | |||||||| | || || | |||||| || ||||| | || ||| || Sbjct 4972 TCCCGGTTTAAGGCCCGTCACATGAGCTATCATGTACGTAAGCAGTGCATACGAGGCGAT 4913 Query 145800 GTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTC 145859 ||| |||||||| ||||| ||||| || | ||| || ||||||||||| || | ||| Sbjct 4912 GTTAAAGGGCACACCCAGACCCATATCTGCGCTGCGTTGATACAGCTGGCAAGACAACTC 4853 Query 145860 CCCGCCCGCC------ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGG 145912 |||| | | |||||||| || ||| || ||||| || |||| ||||| Sbjct 4852 ACCGCGTGTCGTTGATACGTAGAATTGAGCA-AGACAATGGCATGGTGGCAATGCCATCT 4794 Query 145913 CGGGCAGGTCCGCCGGGTTCCAGGCGG 145939 || | ||| |||||||| |||| Sbjct 4793 GCGGTATATCCAAAGGGTTCCAAGCGG 4767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589933167930920