Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq6120 120 2e-22
>seq6120
Length=7451
Score = 120 bits (132), Expect = 2e-22
Identities = 371/565 (66%), Gaps = 12/565 (2%)
Strand=Plus/Minus
Query 97072 TGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATC 97131
|||||||| || | ||||||| || ||||| || | | || ||||| || |||
Sbjct 5001 TGAGCATCGCCAAGCGTGTGAACGAAGTCTCCCGGTTTAAGGCCCGTCACATGAGCTATC 4942
Query 97132 ATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCT 97191
|| | || | || | ||| || |||||||| ||||| || || |||||||| ||
Sbjct 4941 ATGTACGTAAGCAGTGCATACGAGGCGATGTTAAAGGGCACACCCAGACCCATATCTGCG 4882
Query 97192 GATCTTTGATATAACTGACAGGAAAGCTTTCCA----TCAC--ACACATAAAACTGACTC 97245
| |||||| | ||| || || | || || || | || || || ||| |
Sbjct 4881 CTGCGTTGATACAGCTGGCAAGACAACTCACCGCGTGTCGTTGATACGTAGAATTGAG-C 4823
Query 97246 AATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACAT 97304
|| ||| || || || ||||| ||||| | || | ||| || |||||||| ||||
Sbjct 4822 AAGACAATGGCATGGTGGCAATGCCATCTGCGGTATATCCAAAGGGTTCCAAGCGGACAT 4763
Query 97305 CAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATC 97364
| || | | ||| ||||| |||||| ||||||| | ||| | ||||| ||||| ||
Sbjct 4762 AATAATCCGACGATCCGTTGGATTTGTGCGTATGGTTTCAATCACTTGCTTCAATTGGTC 4703
Query 97365 AACGCCTTCTCCACCATAATTGTGCTTA-AGACCTTGATATTCTGCTCCAAAATGCCTCC 97423
||| |||| ||| ||||| | | || ||| ||||| || ||||| || | ||
Sbjct 4702 AACACCTTGTCCGGTATAATCATCGTCGCAGGTCTT-ATATTTGGCGCCAAAGTGACGCC 4644
Query 97424 ATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTAT 97483
|||| || ||||| || || ||||| || | || | |||| |||||| ||||
Sbjct 4643 ATTGAAAACCATATACCGGACCAAGATCGGCCTCGCGACGATCATGGAAACCGCATTTAT 4584
Query 97484 CTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGA-TGCTGCAAGCTCT 97542
| ||| | | | | || ||||||||||||| | | | |||||| ||
Sbjct 4583 CCAAAAATTCACGTGTGCTGTTGCCATCCCAAATGTGTATATTTTTCTCCTGCAACAGCT 4524
Query 97543 TTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAAT 97602
| || ||| || || | | ||||||||||| ||| || || || | | ||||||
Sbjct 4523 TAGC-GTCTGTTTTGCCACCCACAAACCACAACAGTTCCTCGACGACTGCACGCCAAAAG 4465
Query 97603 ACTCTCTTAGTTGTTAAGAGAGGAA 97627
|| | ||| ||||| || | ||||
Sbjct 4464 ACGCGCTTTGTTGTCAATAATGGAA 4440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346701698728610
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |