Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phortica_20variegata_20[genbank_20GCA_5F001014415.1_202015-05-28]
19,473 sequences; 155,550,413 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq489 105 6e-18
seq17788 98.7 9e-16
>seq489
Length=77466
Score = 105 bits (116), Expect = 6e-18
Identities = 151/211 (72%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCT 118587
||||| || | || ||||| |||||||||||||| ||| | |||| |||| ||| |
Sbjct 4412 ACCAAATGCAGGGTCGACTCCTTTTGAATGTTGTAGTCG--GAAAGTGTGCGTCCATCTT 4469
Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647
| || || || || || |||| |||||||| || || || || |||||||| |||||
Sbjct 4470 CCAGTTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCTGGGGGAATGCCCTCTTTGTCCT 4529
Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707
|| || || || | |||| |||||| | ||| ||||| | ||| | || |
Sbjct 4530 GGATCTTAGCCTTGACATTCTCGATGGTGTCAGAAGGCTCAACCTCCAAGGTAATGGTCT 4589
Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| ||||| |||||||| || || ||||||||
Sbjct 4590 TACCGGTGAGAGTTTTGACGAATATCTGCAT 4620
>seq17788
Length=7208
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
||| ||||| || | || || ||||| || || || ||||| | || || |||
Sbjct 2410 CAAAACCAAATGCAAAGTCGATTCTTTCTGGATATTATAATCAGAGAGTGTTCGACCATC 2351
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| | |||||| ||||| |||| ||||| || ||||| ||||| || || || |||||
Sbjct 2350 TTCCAACTGTTTGCCAGCAAAGATTAGACGTTGTTGATCTGGAGGAATTCCTTCTTTGTC 2291
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
||| || ||| || | ||||| ||||||| |||||||| | || | ||
Sbjct 2290 CTGAATCTTGGCTTTGACATTTTCGATAGTGTCCGAAGGTTCGACCTCAAGAGTGATGGT 2231
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| || || || ||||| |||||||||||||||
Sbjct 2230 CTTACCCGTGAGGGTTTTAACAAAAATCTGCATG 2197
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433727440251316
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |